Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1965 ATGAAGGGTGAATTGGAGTTACCTCCAGGATTCAGATTTCACCCGACGGACGAGGAGTTGGTGAATCACTATTTGTGCAGGAAATGTGCTTCCCAGTCTATTGCTGTTCCTATTATCAAAGAGATTGATTTGTACAAGTTTGATCCTTGGCAGCTTCCAGAAATGACGCAATACGGAGAGAAAGAATGGTACTTCTTCTCGCCCAGGGACAGAAAATATCCGAATGGATCAAGACCCAACAGGGCAGCAGGAAGCGGGTACTGGAAGGCGACCGGGGCGGATAAGGCCATAGGGAAGCCCAAGCCTCTCGGAATCAAGAAGGCCCTCGTTTTCTACGCCGGGAAAGCCCCCAAAGGCATCAAAACCAATTGGATCATGCACGAATACCGCCTCGCCAATGTTGATCGCTCTGCTCGCAAGAACAACAACTTGAGGCTTGATGATTGGGTATTGTGCCGGATTTACAACAAGAAAGGTGTGATTGAGAAATTCAACTCCCTGTATCAGAAATCGAGCAACTTCTCCTCCGATGCCGATGAGCATGAAACCAAACCAGAAATCAACACGGCCGCCAACGACCAGTTGTACATGGACACGTCAGAATCGGTGCCGAGGTTGCATACGGACTCCAGCTGCTCCGAGCGCGCGGTGTCGCCGGGCGTCACGTGCTGCGACAAGGAGGTGCAGAGTGAGCCCAAGTGGAATGAGCTGGCACCGGGCTTGAAAGACGGTGCCTTCGATTTCGATTTCAATTACATGGACAATTTGAACAATAACCTCACAGGATTTGACGCTTTTGCCCCTCAGGTCCAGTACCAAACGAATATGAACCAGCTCTCGCCCTTGCAGGACATGTTCATGTATCTCCAGAAACCATTTTAA 882 0.5 MKGELELPPGFRFHPTDEELVNHYLCRKCASQSIAVPIIKEIDLYKFDPWQLPEMTQYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKPLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSARKNNNLRLDDWVLCRIYNKKGVIEKFNSLYQKSSNFSSDADEHETKPEINTAANDQLYMDTSESVPRLHTDSSCSERAVSPGVTCCDKEVQSEPKWNELAPGLKDGAFDFDFNYMDNLNNNLTGFDAFAPQVQYQTNMNQLSPLQDMFMYLQKPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1965 293 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Prci9g1965 293 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Prci9g1965 293 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Prci9g1965 293 FunFam NAC transcription factor 16 161 - -
Prci9g1965 293 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 206 - -
Prci9g1965 293 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1965 Prci-Chr9 30655803 30657524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1965 1 293 NAC Transcription Factor Family AT1G01720 63.455 4.39e-128 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g1965 NAM 3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1965 - - gmx:100814504 446.047