Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1958 ATGGGAGATGGCAATAGTACCACCGGCACCAATCGGTCCAACAACAATAACAGTGGCAGTTACAATAAGCCTGAGTGGCTACAACAGTACGATCTGATAGGGAAAATTGGGGAAGGTACCTATGGTCTTGTGTTCCTCGCAAGGATTAAGTCTGCGACGAATCGCGGAAAATCAATTGCCATCAAGAAATTCAAGCAGTCCAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTCAGGGAGATAACGCATGAAAATGTTGTGAAGCTTGTGAATGTTCACATCAATCATGCAGATATGTCTCTGTATCTAGCTTTTGATTACGCTGAACATGACCTTTATGAAATCATTAGGCATCACAGGGACAAAGTCAGCCATTCTATTAATCAATATACTGTTAAATCATTACTTTGGCAGCTGCTCAATGGACTAAACTATCTGCATAGTAATTGGATAATCCATCGAGACCTTAAGCCATCAAATATATTGGTTATGGGTGAAGGAGAGGAACACGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCACCTTTAAAGCCATTATCTGAAAATGGAGTTGTTGTTACCATTTGGTATCGTGCACCTGAGTTGCTTCTTGGGGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTGTTAACTCTAAAGCCACTATTTCAAGGAGCAGAAGTCAAAGCCACACCTAATCCATTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCCTAGCATATCTTCCCCATTGGCAACAAGATCTTCAGCATATACAAGGGCGCAAATATGACAACACTAGCCTTTGTAATGTTGTACATCTAGCTCCAAAAAGTCCTGCTTATGATCTCCTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGAATAACAGCAGCCCAAGCTTTGGAACATGAGTATTTCAAAATGGAACCACTGCCCGGGCGAAATGCTCTTGTGCCCTGCCAACTTGGAGAGAAAGCTGTGAATTATCCCACTCGTCCAGTTGACACAACAACAGATTTCGAAGGGACAACCAATTTGCAACCTCCTCAACCGGTTTCATCTGGAAATGCTGTTTCTGGCAGCATGACTGGTGGTCATGTATCAAATAGATCTGTCCCTCGGCCAATGAATGTTGTTGGCATGCCAAGGATGCCTCCTATGCAAGCTTATAACCTTGCATCCCAGGCAGGGATGGGTGGTGGAATGAATTCTAGTGGCATCCCATTGCCACGAGGTGTTGCACAGGCTCATCCGCAGCAGCAGTTGAGAAGGAAAGACGGTGGAATGATGTTGCCTGGATACCCTCCACAGCAAAAGTCGAGGCGTAACTAA 1434 0.4407 MGDGNSTTGTNRSNNNNSGSYNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVSHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLAYLPHWQQDLQHIQGRKYDNTSLCNVVHLAPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQLGEKAVNYPTRPVDTTTDFEGTTNLQPPQPVSSGNAVSGSMTGGHVSNRSVPRPMNVVGMPRMPPMQAYNLASQAGMGGGMNSSGIPLPRGVAQAHPQQQLRRKDGGMMLPGYPPQQKSRRN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1958 477 PANTHER CELL DIVISION PROTEIN KINASE 28 346 - -
Prci9g1958 477 ProSitePatterns Protein kinases ATP-binding region signature. 36 63 IPR017441 GO:0005524
Prci9g1958 477 MobiDBLite consensus disorder prediction 375 407 - -
Prci9g1958 477 SUPERFAMILY Protein kinase-like (PK-like) 25 342 IPR011009 -
Prci9g1958 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Prci9g1958 477 SMART serkin_6 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1958 477 FunFam Putative cyclin-dependent kinase E-1 114 353 - -
Prci9g1958 477 ProSiteProfiles Protein kinase domain profile. 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1958 477 CDD STKc_CDK8_like 29 340 - -
Prci9g1958 477 FunFam Cyclin-dependent kinase e-1 18 113 - -
Prci9g1958 477 Gene3D Transferase(Phosphotransferase) domain 1 114 356 - -
Prci9g1958 477 MobiDBLite consensus disorder prediction 1 22 - -
Prci9g1958 477 Gene3D Phosphorylase Kinase; domain 1 13 113 - -
Prci9g1958 477 Pfam Protein kinase domain 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1958 477 MobiDBLite consensus disorder prediction 435 477 - -
Prci9g1958 477 MobiDBLite consensus disorder prediction 375 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1958 Prci-Chr9 30638083 30645348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1958 23 476 Core Cell Cycle Gene Families AT5G63610 77.174 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Prci9g1958 Pkinase 2.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1958 K02208 - qsa:O6P43_023415 828.935