Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1934 ATGGGCAGATCTCCTTGCTGCGAGAAAGAGCACACCAACAAGGGAGCCTGGACCAAGGAGGAAGACCAGCGTCTCATCAACTACATCAAGCTCCATGGTGAGGGCTGCTGGAGATCTCTCCCCAAAGCTGCTGGTTTGCTTCGATGTGGCAAGAGTTGCAGGCTCAGGTGGATTAACTATCTCAGGCCTGATCTCAAGAGAGGCAATTTCACTGAAGAAGAAGACGAGCTCATCATTAACCTCCACAGCCTCCTCGGCAACAAATGGTCTCTGATCGCCGCCAGGTTACCGGGGAGAACCGACAATGAGATCAAGAACTACTGGAACACACATATCAAGCGGAAACTTTATAGCCGCGGAATCGACCCTCAAACGCATCGGCCGCTCAACGCCGCTGTCAACCCCACCGCCACCCCCGCGGCAGATACTGTCGCGGTCATCAGAAGCAACAGTGATGGCAGTGATGACAATAACAGCAAATTTCAGTTAGCGACGACCGAGCTGGGCAGCGCCAACAACAACAATAATGCTACGAAGATCGTAAAAACTGAATCGGCCTGCGAAGACTCGAACAGCAGCAGTGGGCTCACCACAGAAGAAGCCGCCTGTGCGCGTGCGCAGCTCAACTTGGAGCTCACCATAGGCCTTCCCTCTGATCAGCCTTCTCCTGGGAACCGGGACAAGTTTAAACGACAAGCACGAGACCAGCCTCGGCCAGACCAACAAGTCTTGTACCACTGGTATGGCAACTTCAGTAGTTCTAGTCAAGGCGTGTGTTTGTGTTATGGACTAGGGTTTCAAACTAAGGATCAAGCATGTAGCTGCAAATTAGCCATGGGTGCATCTGCTGTTACTACTACTGCTAACCCTCCTGCCGTTACAGAAAACGCGACCGATATGTATAGATTTTACACACCCATGAATATTTAG 930 0.5161 MGRSPCCEKEHTNKGAWTKEEDQRLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAAVNPTATPAADTVAVIRSNSDGSDDNNSKFQLATTELGSANNNNNATKIVKTESACEDSNSSSGLTTEEAACARAQLNLELTIGLPSDQPSPGNRDKFKRQARDQPRPDQQVLYHWYGNFSSSSQGVCLCYGLGFQTKDQACSCKLAMGASAVTTTANPPAVTENATDMYRFYTPMNI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1934 309 CDD SANT 69 112 IPR001005 -
Prci9g1934 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci9g1934 309 CDD SANT 16 61 IPR001005 -
Prci9g1934 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci9g1934 309 SMART sant 66 114 IPR001005 -
Prci9g1934 309 SMART sant 13 63 IPR001005 -
Prci9g1934 309 Gene3D - 68 134 - -
Prci9g1934 309 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci9g1934 309 MobiDBLite consensus disorder prediction 214 238 - -
Prci9g1934 309 FunFam MYB-related transcription factor 13 66 - -
Prci9g1934 309 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci9g1934 309 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci9g1934 309 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 212 - -
Prci9g1934 309 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Prci9g1934 309 FunFam Myb transcription factor 68 137 - -
Prci9g1934 309 Gene3D - 14 66 - -
Prci9g1934 309 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1934 Prci-Chr9 30481160 30482683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1934 1 218 MYB Transcription Factor Family AT4G09460 60.262 7.72e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1934 Myb_DNA-binding 4.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1934 K09422 - gmx:100808083 373.629