Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1933 ATGGATGGTTGTTGTCATCGAGCTATGTTCATTGGCCAGCATGAGGATAATGGAAGTCTACTTTCATCAGACATTCCAAAAGACTTGAAAGATGTTGATGAAGAAACTATTAAGACTGAAACTTTATTTATACCAGTTTTTAAGAAAAGAAAGCGACTCAGCCTTAGTCAGCTTAGAGAGATAAAAGCAGGGTTAGGTGGGAATCAGACACAAACCAGTAGCAAGCTTAAGATGAAGAAGCATGAGAGTAGAGACAGATGGTCATCTGAGAGGTATAAGCTTGCTGAGCAAAGCATGTGGGAGGTCTTGAAGGCTAAAGGAGCAACATTTGCAAACCCAATCTCCCGACCTGCACTACGGATGGCTGCCCGTAAACACATTGGTGATACTGGACTATTGGATCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGATGGGACAGAGCGTTTTAGGCGGTGGTTTAACACCAAAGGAATCATGGAATATTGGTTGGAGAGTGCTAACCTGGATAAGGTCCGCCAGGATGCTGGGGTGCAGGACCCATACTGGATTCCACCATCTACATTTAAAGCAGGAAGTCCCCCTCCTCAGATTTCTGATTCTTCTGGTGAACTGAAACTGCTTCAAACGGAAATGGCCAAAATGAAGAAAGATATGCAGGAGCTCGTAATCAAGAATCAAGAGAAAAATGAAATTAATATGATGGAGGAGACACACAAGGAATTAGTGAAGTGGAAAGCTATGACTGAGCAGCGCCTAACTGGGATTTTCACTTCTTTGAAGGGTGTACAGGGCATGTATGGTGATTTGGTAACTTGGAAAAGTAAAGTTGAGCAACAGCTTGTGGAAATAACAAATAAATTGAGTGATCTGAAAGCATCAAGGGAAGGCACGACCAATCCTCCTTTGGAAAGATGGGAGGATTGGCTTGAAAGTACCAATCTAGAGAATATTCAAGGAGACGATGAGCTTATACCATGGTTTGGGAGTACAGAGCTGGTTAATCTTGAGCAAGAAGCTGCCCTCCAAGATCCTAAGTCAGCCATACCTAGTCAGCTGCTCAATGACAATGTAACTAACATGAAGAGTGATTTGCTGGGAATGTTGTCCAATAAACAAGAGGAAGATCAACCTAATGTGACTCCGGATTCTTCTATGACTGTAAATTCAAAGTCAGACCTCGACAACTCAGTGGTGTTGTTTCAGGAGATGCTTACGGACTTGTTTAAATGGAAAGACAAGATGGAGCAGCAGATGGCTGAGCTATCAAACTATGTATATGGAATGCTGGCGACCAAGTAG 1308 0.4281 MDGCCHRAMFIGQHEDNGSLLSSDIPKDLKDVDEETIKTETLFIPVFKKRKRLSLSQLREIKAGLGGNQTQTSSKLKMKKHESRDRWSSERYKLAEQSMWEVLKAKGATFANPISRPALRMAARKHIGDTGLLDHLLKHIDGKVAPDGTERFRRWFNTKGIMEYWLESANLDKVRQDAGVQDPYWIPPSTFKAGSPPPQISDSSGELKLLQTEMAKMKKDMQELVIKNQEKNEINMMEETHKELVKWKAMTEQRLTGIFTSLKGVQGMYGDLVTWKSKVEQQLVEITNKLSDLKASREGTTNPPLERWEDWLESTNLENIQGDDELIPWFGSTELVNLEQEAALQDPKSAIPSQLLNDNVTNMKSDLLGMLSNKQEEDQPNVTPDSSMTVNSKSDLDNSVVLFQEMLTDLFKWKDKMEQQMAELSNYVYGMLATK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1933 435 Coils Coil 276 296 - -
Prci9g1933 435 SUPERFAMILY Myosin rod fragments 200 296 - -
Prci9g1933 435 Coils Coil 200 234 - -
Prci9g1933 435 PANTHER PROTEIN DYAD 370 433 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1933 Prci-Chr9 30471252 30475097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1933 86 167 PHD Transcription Factor Family AT5G22260 42.169 4.67e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1933 - - gmx:100806484 574.704