Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1924 ATGGAGAAAGCGAGCATAGCCACTTTTCCATCAAAACCCTTATGGGTTCTCCCCTATCGAACCCAACAACTCTCTGAACTTTACACATTGGGAAGGAAATTGGGTCAGGGTCAATTTGGCACCACTTACCTCTGCACAGAAAAGTCCACTGGTCGTGCCTATGCCTGCAAAACAATCCCTAAGCGTAAGCTAATCTGCCAAGAGGATTACGACGACGTTTGGAGGGAGATTCAGATCATGCACCATTTGTCCGAAAATCCCCACGTCGTCAGAATCCATGGCACTTACGAGGACTCCTCCTCTGTTCATTTGGTCATGGAGCTCTGCGGAGGTGGAGAGTTATTCGACAGGATAGTGCAGAAGGGGCATTACAGTGAGAGGCAAGCAGCTACGTTGATCAGGACCATTGTTGAGGTTGTCGAAGCTTGTCATTCTCTTGGGGTCATGCATAGAGACCTCAAACCAGAGAACTTCTTGTTCGATAGCGTCGAAGAGGATGCTAAACTTAAAGCCACTGATTTCGGGATGTCTGTTTTCTACAAGCCAGGTGAAACCTTTTCTGATGTTGTTGGGAGCCCATACTATGTTGCACCAGAGGTGTTACGCAAGCATTATGGACCTGAGTCAGATGTGTGGAGTGCTGGGGTTATTTTGAACATCTTATTAAGTGGGTTGCCACCTTTTTGGGCTGAAAGTGAAATAGGGATCTTCCGACAGATTTTACTAGGAAAATTTGATTTTCAGTCAGAACCATGGCCTAACATCTCAGAAAGTGCCAAGGATCTAATTAGAAAAATGCTTGATCAAAATCCAAAAAAGAGGCTTACAGCCCATGAAGTACTCATGACTTCTGATATACAACATGCAGTACTAAAGTGGTTTGTTGTGTCAGCCCACCCATGGATTGTTGATGACAATATCGCACCTGATAAGCCCCTTGACTCTGCTGTTTTATCACGTCTGAAACAGTTCTCTGCAATGAATAAGCTTAAAAAGATGGCTTTACGTGTAATTGCTGAGAGGCTCTCTGAGGAAGAGATTGGTGGATTGAAGGAGTTATTCAAGATGATTGACACAGACAACAGTGGAACCATAACTTTTGATGAGTTAAAAGATGGTTTAAAGCGAGTGGGGTCTGAACCTATGGAGTCCGAGATCAGGGATCTTATGGATGCAGCTGATATTGATAATAGTGGAACAATTGACTATGGTGAATTCATTGCTGCGACTATCCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCAGCTTTCTCCTATTTTGATAAAGATGGTAGTGGTTACATAACCACTGATGAGATTCAACAAGCCTGTAAGGAATTTGGTTTAGGCGATGTCCATATTGATGAAATGATCAAAGAAATTGATCAAGACAATGATGGAAAAATAGATTATGGGGAATTTGCTGCAATGATGAGGATGGGCAATGGAGGAATTGGAAGGCGAACCATAAGAAACACACTAGATTTCAGGGATGCTCTGGGATTGATAGGCACTGGCTCTAATGACATCATGAATGGTTAG 1548 0.4309 MEKASIATFPSKPLWVLPYRTQQLSELYTLGRKLGQGQFGTTYLCTEKSTGRAYACKTIPKRKLICQEDYDDVWREIQIMHHLSENPHVVRIHGTYEDSSSVHLVMELCGGGELFDRIVQKGHYSERQAATLIRTIVEVVEACHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGMSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILNILLSGLPPFWAESEIGIFRQILLGKFDFQSEPWPNISESAKDLIRKMLDQNPKKRLTAHEVLMTSDIQHAVLKWFVVSAHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEPMESEIRDLMDAADIDNSGTIDYGEFIAATIHLNKLEREENLLSAFSYFDKDGSGYITTDEIQQACKEFGLGDVHIDEMIKEIDQDNDGKIDYGEFAAMMRMGNGGIGRRTIRNTLDFRDALGLIGTGSNDIMNG 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1924 515 ProSiteProfiles EF-hand calcium-binding domain profile. 417 452 IPR002048 GO:0005509
Prci9g1924 515 ProSiteProfiles EF-hand calcium-binding domain profile. 345 380 IPR002048 GO:0005509
Prci9g1924 515 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Prci9g1924 515 ProSitePatterns EF-hand calcium-binding domain. 430 442 IPR018247 -
Prci9g1924 515 FunFam Calcium-dependent protein kinase 1 30 113 - -
Prci9g1924 515 SMART serkin_6 28 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1924 515 Gene3D - 295 482 - -
Prci9g1924 515 ProSiteProfiles Protein kinase domain profile. 28 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1924 515 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Prci9g1924 515 FunFam Calcium-dependent protein kinase SK5 415 510 - -
Prci9g1924 515 SUPERFAMILY Protein kinase-like (PK-like) 14 302 IPR011009 -
Prci9g1924 515 CDD EFh 422 481 IPR002048 GO:0005509
Prci9g1924 515 Pfam Protein kinase domain 28 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1924 515 CDD STKc_CAMK 28 301 - -
Prci9g1924 515 Pfam EF-hand domain pair 350 410 IPR002048 GO:0005509
Prci9g1924 515 Pfam EF-hand domain pair 420 481 IPR002048 GO:0005509
Prci9g1924 515 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
Prci9g1924 515 Gene3D Phosphorylase Kinase; domain 1 30 113 - -
Prci9g1924 515 SUPERFAMILY EF-hand 341 481 IPR011992 -
Prci9g1924 515 SMART efh_1 385 413 IPR002048 GO:0005509
Prci9g1924 515 SMART efh_1 455 483 IPR002048 GO:0005509
Prci9g1924 515 SMART efh_1 349 377 IPR002048 GO:0005509
Prci9g1924 515 SMART efh_1 421 449 IPR002048 GO:0005509
Prci9g1924 515 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Prci9g1924 515 FunFam Calcium-dependent protein kinase SK5 114 314 - -
Prci9g1924 515 ProSiteProfiles EF-hand calcium-binding domain profile. 455 486 IPR002048 GO:0005509
Prci9g1924 515 FunFam calcium-dependent protein kinase SK5 339 411 - -
Prci9g1924 515 ProSitePatterns EF-hand calcium-binding domain. 358 370 IPR018247 -
Prci9g1924 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Prci9g1924 515 Gene3D Transferase(Phosphotransferase) domain 1 114 294 - -
Prci9g1924 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 476 - -
Prci9g1924 515 CDD EFh 350 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1924 Prci-Chr9 30446723 30450756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1924 10 511 EF-hand Containing Proteins AT1G35670 74.308 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci9g1924 Pkinase 2.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1924 K13412 - qsa:O6P43_030287 857.825