Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1902 ATGGAAAGGATGAACTTTGTGAAGAATGGAGTTTGCAGATTGCCTCCTGGATTTAGGTTCCAGCCAACAGATGAAGAGCTCGTGTTTCAGTACTTGAAATGCAAGGTTCTTTCATGTCCACTGCCTACATCAATCATTCCTGAAATCAATGTCTGCAACTACGATCCTTGGGATTTGCCAGGTAACTGTGAAGAGCAAGAGAGGTACTTCTTCAGTTACAAAGAAGCGAAATACAGAAATGGTAATCGCATGAACCGAAACACCAAGCCTGGGCATTGGAAGGCAACCGGTTCAGAGAAGAAAATATCATCCCCAACCAATAATAATAAAAATAATAATTGCAGTTTTTCTGGGGTAAGAAAAACCTTAGTTTTTTACGAAGGGAAGACTCCAAACGGCTTCAGAACTAACTGGGTGATGCACGAATATCGCTTGTCATTGCAGAAACCAGTGAGCAAGTATTTGCAGAATCATGGGAGCGAGGTGGGAGATTGGGTTCTGTGTCGGATAAGCATGAAGACGAGAAGCGAAGGTAGTGAGGTGGGGGAAAGAAGATTGTTTTATTTTACGAGGGAACTCCATTATTCTGACCCGTCATCGTCTTGTTCCAGTTCAAGCGACATCACAGAGGTGGTTTCACGCGTAGCAGATCATGAAGAAACAAGTGCCTGTAGTACTATAATCTTGACTTTTGAACATTAA 702 0.4245 MERMNFVKNGVCRLPPGFRFQPTDEELVFQYLKCKVLSCPLPTSIIPEINVCNYDPWDLPGNCEEQERYFFSYKEAKYRNGNRMNRNTKPGHWKATGSEKKISSPTNNNKNNNCSFSGVRKTLVFYEGKTPNGFRTNWVMHEYRLSLQKPVSKYLQNHGSEVGDWVLCRISMKTRSEGSEVGERRLFYFTRELHYSDPSSSCSSSSDITEVVSRVADHEETSACSTIILTFEH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1902 233 Gene3D NAC domain 23 179 IPR036093 GO:0003677|GO:0006355
Prci9g1902 233 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Prci9g1902 233 SUPERFAMILY NAC domain 9 173 IPR036093 GO:0003677|GO:0006355
Prci9g1902 233 Pfam No apical meristem (NAM) protein 15 145 IPR003441 GO:0003677|GO:0006355
Prci9g1902 233 PANTHER NAC TRANSCRIPTION FACTOR 56 14 196 - -
Prci9g1902 233 MobiDBLite consensus disorder prediction 81 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1902 Prci-Chr9 30324978 30326019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1902 1 176 NAC Transcription Factor Family AT5G13180 57.386 1.26e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci9g1902 NAM 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1902 - - gmx:100527806 267.314