Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1894 ATGGATGATGGCCACCAGCGTGAAAATGGTAGGCAGAAGGTGGACTACTACAGAGGAGCTCATTCCCTGTGGAGTATGGCTCCCCAACATCAGGTAAAGGAACCGAATGCCTTGGTTATGAATAAGAAGATTATGTCTGTTATTGCTGAGAGAGAAGCGGCAATTCGAGAACGGAATGCAGCTTTATCTGAAAAGAATGAAGCATTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCACTCCTGCAGAGGGATAGTGCCTTGATGGAACGGGATAATGCTCTTGCTGCCCTACAAATCCAGGATAATGCTACCAACTTCTCATTGGGTTGTGGCACTCAACGTGGATCAAAGAGGTTGCACCATTCCTCCAATCATTTCAGTCAAATGGCAGAAACTGCTTATAGAACAAAGGACTTGACCACAACTGATGCTTTCCCAGTAACTATTGTAGCTTCTGAAGCAGGCAAGTATGACCAGGCTAAGAGAACAAGGGATGACAAAACAGATTCTTCTAAGGTGTCAAAACCGTCAGGCAAAGGTAAAAAAGTGAGTAAGGACTTAAACAGGAGGGCTTCTTCTGAAGTGACAAAAATCAAATCTGAGTGGGATAAACAGGATGTTGGTTTGAATTTGATTCAATTTGATGAGAATACCATGCCAGCCCCCGTTTGCACATGTACCGGAGTTCCACGGCAATGCTACAAATGGGGGAACGGTGGGTGGCAGTCATCTTGTTGTACCACCACCTTATCCATGTATCCACTACCACAGCTTCCTAATAAGCGACATGCGCGAGTTGGGGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTTAGCAGGGTGGCCGCGCAAGGCCGGGATTTATCCATGCCATTGGATCTCAAGGACTACTGGGCAAGACATGGAACAAATCGCTATATCACGATCAAGTAA 948 0.4641 MDDGHQRENGRQKVDYYRGAHSLWSMAPQHQVKEPNALVMNKKIMSVIAEREAAIRERNAALSEKNEALAARDEALRQRDEALLQRDSALMERDNALAALQIQDNATNFSLGCGTQRGSKRLHHSSNHFSQMAETAYRTKDLTTTDAFPVTIVASEAGKYDQAKRTRDDKTDSSKVSKPSGKGKKVSKDLNRRASSEVTKIKSEWDKQDVGLNLIQFDENTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAQGRDLSMPLDLKDYWARHGTNRYITIK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1894 315 Pfam GAGA binding protein-like family 1 315 IPR010409 -
Prci9g1894 315 Coils Coil 59 85 - -
Prci9g1894 315 PANTHER - 1 315 IPR010409 -
Prci9g1894 315 MobiDBLite consensus disorder prediction 160 200 - -
Prci9g1894 315 SMART GAGA_bind_2 1 315 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1894 Prci-Chr9 30282370 30285584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1894 1 315 BBR or BPC Transcription factor family AT2G21240 57.098 2.68e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Prci9g1894 GAGA_bind 2.1e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1894 - - jre:108986984 495.352