Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1890 ATGACAACAACCGACCCCTCCGACTCCGATCCTATCACTGTCTCCGATCACCTTCTTTCCTTTCTTCTCGCCGAAACCCCCACCGTCCTTCACTTCAAAGGCAAGTGGTCCCTCATCACTTCGAAACTTCACCTTCTTCACTCTCGACTTGCCGATTTCTCCTCCTCCTCGAACTCTCTCTCTCTAGACCTTCTTCTCTCCGTATCCCACACCCTCAACGATGCCGTTTCCCTCGTCAAGGATTGCCAGTTCCCCACCTTGTCAAGCGGAAAACTCAAGACCCAGAGCCTCATTGACTCCCTCCTTGCCAGCCTCGATCGCCATCTCGCAGACTGCGACGTTCTCTTCAAAAGCGGCGTCCTCCTGGACGACGCCGTTTCAACTGCCTCTAACAGGGACTCTGCTCGATCTGAATCCAGAAATTTGATCACTCGTTTGCAAATTGGGTCGTCGGATTCTAGGATTTCGGCTATGGGCTCCTTTCTGGGTTTACTACATGAGGATGATAAGAATGTGATGATAGCTGTGGCACAGGGCGTGGTTCCCGTGCTCGTTCGCTTACTGGATTCGAGCTCTTCAGAAATGAAGGAGAAGATCGTCGCCGCGATATCCAGAGTTTCAACGGTGGATAGCAGTACATATGCATTAATCGCCGAGGGTTTAGTGCTTTTGAATAATCTTCTTCGAGTTCTTGACCATGGAAGTGGGTTTGCTAAAGAGAAAGCCTGTATTGCCCTCCAAGCTCTAACGTTCTCTAAAGAGAACGCTAGGGCAATCGGGTCTAGAGGTGGTATTTCTTCCCTATTGGACATTTGCCAAGTAGGCACGCCGGGTTCCCAAGCTTCCGCAGCTGGAGTTCTGAGAAATCTTGCCGTTTTCCCTGAAGTCAGAGAAAACTTCGTCGAGGAGAATGCGGTTGTTGTTCTGCTAGAGCTCGCTTCTTCGGGTACTGCAATAGCCCAAGAAAATGCAATTGGTTGTTTGTCTAACCTAATTTCTGATGACGAAACTCTGAAATTAATGTGTGCTAAGGAAGGAGGGATTGAGTGTTTGAAGAATTTCTGGGACTCAATTCCGTCCGTTCAGAGTCTTGAAGTTGCGATTGAGTTATTGAGGTGCATGGCATCAAGCCCATCGATTGCTGAACTTCTTATCTCAGATGGGTTCATCCAGAGACTCGTGGGCGCGTTACATTGTGGTGTATTGAGGGTGAGAATTGCGGCCGCTCGAGCTGTTTATGCTCTGGGGTCCAGCACCACAAAGGCGAAGAAGGAGATGGGCGAATGTGGATGCATTACTCCATTGATCCAGATGTTGGATGGCAAAGCCGTAGAAGAGAAAGAAGCAGCTGCAATGGCTTTGTCAACACTCATGTTATATACGGGCAATAGAAGGATTTTCCTGAAGGATGAGAGGGGTATAATGAGTGCGGTTCAGCTTTTGGATCCGTCAATACAGAATTTGGACAAGAAATTCCCAGTTTCCATTCTGTTATCACTTGTGCATTCTAAGAATTGTAAAAAGCAAATTGCAGCAGCTGGTGCCAGTGAATATACACGAAAACTTGTAGGGATGGATGTTGAGGGGTCTAAGAAACTCTTGGATAGCCTTGGTCGTGCAAAGATATGGGGAGCATTTGCAAGATCCTTAAGATGA 1656 0.4789 MTTTDPSDSDPITVSDHLLSFLLAETPTVLHFKGKWSLITSKLHLLHSRLADFSSSSNSLSLDLLLSVSHTLNDAVSLVKDCQFPTLSSGKLKTQSLIDSLLASLDRHLADCDVLFKSGVLLDDAVSTASNRDSARSESRNLITRLQIGSSDSRISAMGSFLGLLHEDDKNVMIAVAQGVVPVLVRLLDSSSSEMKEKIVAAISRVSTVDSSTYALIAEGLVLLNNLLRVLDHGSGFAKEKACIALQALTFSKENARAIGSRGGISSLLDICQVGTPGSQASAAGVLRNLAVFPEVRENFVEENAVVVLLELASSGTAIAQENAIGCLSNLISDDETLKLMCAKEGGIECLKNFWDSIPSVQSLEVAIELLRCMASSPSIAELLISDGFIQRLVGALHCGVLRVRIAAARAVYALGSSTTKAKKEMGECGCITPLIQMLDGKAVEEKEAAAMALSTLMLYTGNRRIFLKDERGIMSAVQLLDPSIQNLDKKFPVSILLSLVHSKNCKKQIAAAGASEYTRKLVGMDVEGSKKLLDSLGRAKIWGAFARSLR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1890 551 SMART arm_5 419 459 IPR000225 GO:0005515
Prci9g1890 551 SMART arm_5 293 333 IPR000225 GO:0005515
Prci9g1890 551 SMART arm_5 377 417 IPR000225 GO:0005515
Prci9g1890 551 SMART arm_5 252 292 IPR000225 GO:0005515
Prci9g1890 551 SMART arm_5 334 376 IPR000225 GO:0005515
Prci9g1890 551 SMART arm_5 168 208 IPR000225 GO:0005515
Prci9g1890 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 179 221 IPR000225 GO:0005515
Prci9g1890 551 Gene3D - 356 533 IPR011989 -
Prci9g1890 551 Gene3D - 128 355 IPR011989 -
Prci9g1890 551 Pfam Armadillo/beta-catenin-like repeat 168 205 IPR000225 GO:0005515
Prci9g1890 551 SUPERFAMILY ARM repeat 141 487 IPR016024 -
Prci9g1890 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 16 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1890 Prci-Chr9 30275737 30279083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1890 84 408 U-box Gene Family AT2G23140 25.731 3.04e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1890 - - qsa:O6P43_023524 680.248