Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1880 ATGCTCTGGATTCTGATCTCTGAACACTCCAAAAGTGAAGAACCTCACTCATCTTCATCCAAGAGTCACCTTCAGGGCAGTGACGAAGAAGAGGAGCCTAAGATCACATTTCCTCTTGACGCTTCCGATCGGGTGCTGTTTATGTTGGGAGATATCACGTCAGGGCCTGCCATTAGCTTCACCGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCTCGCCCCACCGCCATACGAGGCCACTTGACACTATGCCTGCTTCTAGCCCTGGAGAAGCAAAATGTGATACCCTTCATGAGGAAACAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCCATGCTGGATGTTGAATCAAGCTCCTCTTCCTGGGATAGGCTATCTTCAGTGCATCATGTTGAATACAGCAGCAGCAATGACTATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTCTTCTTCGCCTTTTTCCGTCACTTTGGAAATGATGATACTCTTCCAAAGGAGGCAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGATTGTGAATTTGCCAAGTGGTTGGGAGTTCGAACCCCACAGGGTAGAGTGATTCATAATACTAGTCTTGAATGGCTCCAAATAAAGGATGCAGCAGAAAATGCAAGAGCTGCAGCTGATTCTGAAGGAGATGAAGCTGGTAACATGACATGCACAGAGCTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTATGTGCATGGGTCACCTTTACTTGAAAGTTCTAGTGCATTCGAGTACCAAGAGTCAGTAGAAAGAACATCAGCAGCTCTTGGCAAGGTGTTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGGTTATCTCTGCGAATACTGATACACTAGAGGAAGCTTTTGATTCTGCAATGCATCTATATAGACCAAGGGTGATCAGGACACTTCAAAAAGAAAGAAGGTCAACTTCATCAGATAGCAGATTGAGTTCTCATAACCCTGGACTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTGTCTAACATAAGCCTTCAAAGCTACACATCAAGTGAAGCACTCTTTACTGACTTAAACATTGTGGCTATTGATTCTGGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTTGCCTCCAACCTCTTGCATGATATAACTGGAGGTAAATTAGGATCTCCTTTGCCAGAAGTCCCAAATTCAACAACTGATGTTCATTCAAATGACATGACATCAGCAGTTCATGCATTCCGTACTGGTTTTCGTGCCGCTCTTAGGGATCTGCAGGGATTTCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTCGTTAAGATCATTTATGAACATTATGAGCAAATTATCAACGGGGGAATTTGACAAATATGATTCATTGGTTTCACCTGACACCACTTCACAGGCAGCTGGAGGTGGTAACTGTTCCTCTCCATCAAGTAAAGAGAGATCTGTTAATGATAACCTTCCAGATTGTGATTCAGAACTACAGAAAACATATCAAAGGGCATCCTGTTCTGGCAGTAGAGATGATTCTGAATTTTCTGCCTTGACGAGAGAGGGTTGGCATGGAAAGTTTTGTAAAGGAAGCGGGGAACCACTACGAAGTCTCCGCTTGACGGCGAAGCTCCGTGACTTCCATAAGTTTGCAAAGGTCGATGCAGAGTCTAACAGAGAATTAGAACAGTGGAATGAAATGCTTAAAAATGATGCTGTCAGGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGTAGTGATAATTACTGTGTCATTGATGCTTACGAACTGAAGGTCAGACTTGAGCATATTCTTGAGCGAATTGCATTGATATCTGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTTGCAAATAATCTGTTCATAGGTGGAGCACTCGCTGCAAGGTCTTTGTACACACTTCAACAATTGGGAATCACACATATTATGTGTTTGTGCACGAATGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTCGAAATGCACCTTACTTGA 2292 0.4337 MLWILISEHSKSEEPHSSSSKSHLQGSDEEEEPKITFPLDASDRVLFMLGDITSGPAISFTEWLDLVRKRTAMYRSSGSPHRHTRPLDTMPASSPGEAKCDTLHEETTEINLSERLGKAAMLDVESSSSSWDRLSSVHHVEYSSSNDYSEDDMNKPLEVTVHSGGVVFFAFFRHFGNDDTLPKEAAAVIKISSTRMATQSERLDCEFAKWLGVRTPQGRVIHNTSLEWLQIKDAAENARAAADSEGDEAGNMTCTELLEALELSRCLFFMGYVHGSPLLESSSAFEYQESVERTSAALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKVISANTDTLEEAFDSAMHLYRPRVIRTLQKERRSTSSDSRLSSHNPGLVSQVSDISEMAESPRLSNISLQSYTSSEALFTDLNIVAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGSPLPEVPNSTTDVHSNDMTSAVHAFRTGFRAALRDLQGFHIFLLTLHQKLDSSLRSFMNIMSKLSTGEFDKYDSLVSPDTTSQAAGGGNCSSPSSKERSVNDNLPDCDSELQKTYQRASCSGSRDDSEFSALTREGWHGKFCKGSGEPLRSLRLTAKLRDFHKFAKVDAESNRELEQWNEMLKNDAVRLCQENNFNTGFFEGSDNYCVIDAYELKVRLEHILERIALISEAANSEKPSRVANNLFIGGALAARSLYTLQQLGITHIMCLCTNEIGQSDSQFPDLFAYKNFFEMHLT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1880 763 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 29 757 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci9g1880 763 MobiDBLite consensus disorder prediction 545 573 - -
Prci9g1880 763 SUPERFAMILY Protein kinase-like (PK-like) 62 438 IPR011009 -
Prci9g1880 763 MobiDBLite consensus disorder prediction 8 32 - -
Prci9g1880 763 MobiDBLite consensus disorder prediction 75 99 - -
Prci9g1880 763 Gene3D Protein tyrosine phosphatase superfamily 681 762 IPR029021 -
Prci9g1880 763 Gene3D - 278 408 IPR036940 -
Prci9g1880 763 Pfam Actin-fragmin kinase, catalytic 109 424 IPR015275 -
Prci9g1880 763 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1880 Prci-Chr9 30211896 30220349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1880 28 757 Protein tyrosine phosphatase (PTP) family AT5G23720 59.865 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1880 K14165 - gmx:100791993 994.956