Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1879 ATGCAGGTGCTGTTTATGTTGGGAGATATCACGTCAGGGCCTGCCATTAGCTTCACCGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCTCGCCCCACCGCCATACGAGGCCACTTGACACTATGCCTGCTTCTAGCCCTGGAGAAGCAAAATGTGATACCCTTCATGAGGAAACAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCCATGCTGGATGTTGAATCAAGCTCCTCTTCCTGGGATAGGCTATCTTCAGTGCATCATGTTGAATACAGCAGCAGCAATGACTATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTCTTCTTCGCCTTTTTCCGTCACTTTGGAAATGATGATACTCTTCCAAAGGAGGCAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGATTGTGAATTTGCCAAGTGGTTGGGAGTTCGAACCCCACAGGGTAGAGTGATTCATAATACTAGTCTTGAATGGCTCCAAATAAAGGATGCAGCAGAAAATGCAAGAGCTGCAGCTGATTCTGAAGGAGATGAAGCTGGTAACATGACATGCACAGAGCTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTATGTGCATGGGTCACCTTTACTTGAAAGTTCTAGTGCATTCGAGTACCAAGAGTCAGTAGAAAGAACATCAGCAGCTCTTGGCAAGGTGTTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGGTTATCTCTGCGAATACTGATACACTAGAGGAAGCTTTTGATTCTGCAATGCATCTATATAGACCAAGGGTGATCAGGACACTTCAAAAAGAAAGAAGGTCAACTTCATCAGATAGCAGATTGAGTTCTCATAACCCTGGACTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTGTCTAACATAAGCCTTCAAAGCTACACATCAAGTGAAGCACTCTTTACTGACTTAAACATTGTGGCTATTGATTCTGGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTTGCCTCCAACCTCTTGCATGATATAACTGGAGGTAAATTAGGATCTCCTTTGCCAGAAGTCCCAAATTCAACAACTGATGTTCATTCAAATGACATGACATCAGCAGTTCATGCATTCCGTACTGGTTTTCGTGCCGCTCTTAGGGATCTGCAGGGATTTCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTCGTTAAGATCATTTATGAACATTATGAGCAAATTATCAACGGGGGAATTTGACAAATATGATTCATTGGTTTCACCTGACACCACTTCACAGGCAGCTGGAGGTGGTAACTGTTCCTCTCCATCAAGTAAAGAGAGATCTGTTAATGATAACCTTCCAGATTGTGATTCAGAACTACAGAAAACATATCAAAGGGCATCCTGTTCTGGCAGTAGAGATGATTCTGAATTTTCTGCCTTGACGAGAGAGGGTTGGCATGGAAAGTTTTGTAAAGGAAGCGGGGAACCACTACGAAGTCTCCGCTTGACGGCGAAGCTCCGTGACTTCCATAAGTTTGCAAAGGTCGATGCAGAGTCTAACAGAGAATTAGAACAGTGGAATGAAATGCTTAAAAATGATGCTGTCAGGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGTAGTGATAATTACTGTGTCATTGATGCTTACGAACTGAAGGTCAGACTTGAGCATATTCTTGAGCGAATTGCATTGATATCTGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTTGCAAATAATCTGTTCATAGGTGGAGCACTCGCTGCAAGGTCTTTGTACACACTTCAACAATTGGGAATCACACATATTATGTGTTTGTGCACGAATGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTCGTATGCGATGACGAAGATTCTAACATTAATAGCATATTTGAAGAAGCTTGTGATCTAATAAGTTATGTTGAGGAAGCAGGTCATAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAAATGCACCTTACTTGAAGCATGGAATGCAATGAAACGGGTCCACCGGCGAGCTCAGCCGAACGATGGTTTTGCGAAGATCTTAATGGAACTGGATCAGAAACTGCATGGAAAAATGTCCATGGTGTGGCAGCAAAGGAAACCGACGATGAAAATTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGTTCTCTTAAGCTGCATCTGCAGAAATCGCACAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTGGCAGCTTTGAAGATTAGTCGTGGTGGAAGCGTCAGCCCTAAACAGAGGCAGTCTCATTCAATTATGGATGAACGGAGACCGTAG 2676 0.4316 MQVLFMLGDITSGPAISFTEWLDLVRKRTAMYRSSGSPHRHTRPLDTMPASSPGEAKCDTLHEETTEINLSERLGKAAMLDVESSSSSWDRLSSVHHVEYSSSNDYSEDDMNKPLEVTVHSGGVVFFAFFRHFGNDDTLPKEAAAVIKISSTRMATQSERLDCEFAKWLGVRTPQGRVIHNTSLEWLQIKDAAENARAAADSEGDEAGNMTCTELLEALELSRCLFFMGYVHGSPLLESSSAFEYQESVERTSAALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKVISANTDTLEEAFDSAMHLYRPRVIRTLQKERRSTSSDSRLSSHNPGLVSQVSDISEMAESPRLSNISLQSYTSSEALFTDLNIVAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGSPLPEVPNSTTDVHSNDMTSAVHAFRTGFRAALRDLQGFHIFLLTLHQKLDSSLRSFMNIMSKLSTGEFDKYDSLVSPDTTSQAAGGGNCSSPSSKERSVNDNLPDCDSELQKTYQRASCSGSRDDSEFSALTREGWHGKFCKGSGEPLRSLRLTAKLRDFHKFAKVDAESNRELEQWNEMLKNDAVRLCQENNFNTGFFEGSDNYCVIDAYELKVRLEHILERIALISEAANSEKPSRVANNLFIGGALAARSLYTLQQLGITHIMCLCTNEIGQSDSQFPDLFAYKNFFVCDDEDSNINSIFEEACDLISYVEEAGHRILVHCFEGKSRSVTLVLAYLMLRKKCTLLEAWNAMKRVHRRAQPNDGFAKILMELDQKLHGKMSMVWQQRKPTMKICPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPKQRQSHSIMDERRP 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1879 891 Pfam Dual specificity phosphatase, catalytic domain 671 802 IPR000340 GO:0008138|GO:0016311
Prci9g1879 891 MobiDBLite consensus disorder prediction 503 531 - -
Prci9g1879 891 SUPERFAMILY Protein kinase-like (PK-like) 20 396 IPR011009 -
Prci9g1879 891 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 730 782 IPR000387 GO:0016311|GO:0016791
Prci9g1879 891 MobiDBLite consensus disorder prediction 870 891 - -
Prci9g1879 891 ProSiteProfiles Dual specificity protein phosphatase domain profile. 661 806 IPR020422 GO:0006470|GO:0008138
Prci9g1879 891 CDD DSP 662 799 - -
Prci9g1879 891 Gene3D Protein tyrosine phosphatase superfamily 639 807 IPR029021 -
Prci9g1879 891 Pfam Actin-fragmin kinase, catalytic 67 382 IPR015275 -
Prci9g1879 891 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 2 887 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci9g1879 891 MobiDBLite consensus disorder prediction 33 57 - -
Prci9g1879 891 FunFam Dual specificity protein phosphatase PHS1 633 807 - -
Prci9g1879 891 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 661 806 IPR029021 -
Prci9g1879 891 Gene3D - 236 365 IPR036940 -
Prci9g1879 891 SMART dsp_5 661 803 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1879 Prci-Chr9 30211529 30218409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1879 2 872 Protein tyrosine phosphatase (PTP) family AT5G23720 62.656 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1879 K14165 - gmx:100791993 1260.36