Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1878 ATGTTGGGAGATATCACGTCAGGGCCTGCCATTAGCTTCACCGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCTCGCCCCACCGCCATACGAGGCCACTTGACACTATGCCTGCTTCTAGCCCTGGAGAAGCAAAATGTGATACCCTTCATGAGGAAACAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCCATGCTGGATGTTGAATCAAGCTCCTCTTCCTGGGATAGGCTATCTTCAGTGCATCATGTTGAATACAGCAGCAGCAATGACTATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTCTTCTTCGCCTTTTTCCGTCACTTTGGAAATGATGATACTCTTCCAAAGGAGGCAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGATTGTGAATTTGCCAAGTGGTTGGGAGTTCGAACCCCACAGGGTAGAGTGATTCATAATACTAGTCTTGAATGGCTCCAAATAAAGGATGCAGCAGAAAATGCAAGAGCTGCAGCTGATTCTGAAGGAGATGAAGCTGGTAACATGACATGCACAGAGCTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTATGTGCATGGGTCACCTTTACTTGAAAGTTCTAGTGCATTCGAGTACCAAGAGTCAGTAGAAAGAACATCAGCAGCTCTTGGCAAGGTGTTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGGTTATCTCTGCGAATACTGATACACTAGAGGAAGCTTTTGATTCTGCAATGCATCTATATAGACCAAGGGTGATCAGGACACTTCAAAAAGAAAGAAGGTCAACTTCATCAGATAGCAGATTGAGTTCTCATAACCCTGGACTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTGTCTAACATAAGCCTTCAAAGCTACACATCAAGTGAAGCACTCTTTACTGACTTAAACATTGTGGCTATTGATTCTGGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTTGCCTCCAACCTCTTGCATGATATAACTGGAGGTAAATTAGGATCTCCTTTGCCAGAAGTCCCAAATTCAACAACTGATGTTCATTCAAATGACATGACATCAGCAGTTCATGCATTCCGTACTGGTTTTCGTGCCGCTCTTAGGGATCTGCAGGGATTTCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTCGTTAAGATCATTTATGAACATTATGAGCAAATTATCAACGGGGGAATTTGACAAATATGATTCATTGGTTTCACCTGACACCACTTCACAGGCAGCTGGAGGTGGTAACTGTTCCTCTCCATCAAGTAAAGAGAGATCTGTTAATGATAACCTTCCAGATTGTGATTCAGAACTACAGAAAACATATCAAAGGGCATCCTGTTCTGGCAGTAGAGATGATTCTGAATTTTCTGCCTTGACGAGAGAGGGTTGGCATGGAAAGTTTTGTAAAGGAAGCGGGGAACCACTACGAAGTCTCCGCTTGACGGCGAAGCTCCGTGACTTCCATAAGTTTGCAAAGGTCGATGCAGAGTCTAACAGAGAATTAGAACAGTGGAATGAAATGCTTAAAAATGATGCTGTCAGGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGTAGTGATAATTACTGTGTCATTGATGCTTACGAACTGAAGGTCAGACTTGAGCATATTCTTGAGCGAATTGCATTGATATCTGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTTGCAAATAATCTGTTCATAGGTGGAGCACTCGCTGCAAGGTCTTTGTACACACTTCAACAATTGGGAATCACACATATTATGTGTTTGTGCACGAATGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTCGTATGCGATGACGAAGATTCTAACATTAATAGCATATTTGAAGAAGCTTGTGATCTAATAAGTTATGTTGAGGAAGCAGGTCATAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAAATGCACCTTACTTGAAGCATGGAATGCAATGAAACGGGTCCACCGGCGAGCTCAGCCGAACGATGGTTTTGCGAAGATCTTAATGGAACTGGATCAGAAACTGCATGGAAAAATGTCCATGGTGTGGCAGCAAAGGAAACCGACGATGAAAATTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGTTCTCTTAAGCTGCATCTGCAGAAATCGCACAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTGGCAGCTTTGAAGATTAGTCGTGGTGGAAGCGTCAGCCCTAAACAGAGGCAGTCTCATTCAATTATGGATGAACGGAGACCGTAG 2661 0.4314 MLGDITSGPAISFTEWLDLVRKRTAMYRSSGSPHRHTRPLDTMPASSPGEAKCDTLHEETTEINLSERLGKAAMLDVESSSSSWDRLSSVHHVEYSSSNDYSEDDMNKPLEVTVHSGGVVFFAFFRHFGNDDTLPKEAAAVIKISSTRMATQSERLDCEFAKWLGVRTPQGRVIHNTSLEWLQIKDAAENARAAADSEGDEAGNMTCTELLEALELSRCLFFMGYVHGSPLLESSSAFEYQESVERTSAALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKVISANTDTLEEAFDSAMHLYRPRVIRTLQKERRSTSSDSRLSSHNPGLVSQVSDISEMAESPRLSNISLQSYTSSEALFTDLNIVAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGSPLPEVPNSTTDVHSNDMTSAVHAFRTGFRAALRDLQGFHIFLLTLHQKLDSSLRSFMNIMSKLSTGEFDKYDSLVSPDTTSQAAGGGNCSSPSSKERSVNDNLPDCDSELQKTYQRASCSGSRDDSEFSALTREGWHGKFCKGSGEPLRSLRLTAKLRDFHKFAKVDAESNRELEQWNEMLKNDAVRLCQENNFNTGFFEGSDNYCVIDAYELKVRLEHILERIALISEAANSEKPSRVANNLFIGGALAARSLYTLQQLGITHIMCLCTNEIGQSDSQFPDLFAYKNFFVCDDEDSNINSIFEEACDLISYVEEAGHRILVHCFEGKSRSVTLVLAYLMLRKKCTLLEAWNAMKRVHRRAQPNDGFAKILMELDQKLHGKMSMVWQQRKPTMKICPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPKQRQSHSIMDERRP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1878 886 Pfam Dual specificity phosphatase, catalytic domain 666 797 IPR000340 GO:0008138|GO:0016311
Prci9g1878 886 Gene3D Protein tyrosine phosphatase superfamily 634 802 IPR029021 -
Prci9g1878 886 Gene3D - 231 484 IPR036940 -
Prci9g1878 886 CDD DSP 657 794 - -
Prci9g1878 886 ProSiteProfiles Dual specificity protein phosphatase domain profile. 656 801 IPR020422 GO:0006470|GO:0008138
Prci9g1878 886 MobiDBLite consensus disorder prediction 865 886 - -
Prci9g1878 886 FunFam Dual specificity protein phosphatase PHS1 628 802 - -
Prci9g1878 886 SUPERFAMILY Protein kinase-like (PK-like) 15 391 IPR011009 -
Prci9g1878 886 MobiDBLite consensus disorder prediction 28 52 - -
Prci9g1878 886 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 725 777 IPR000387 GO:0016311|GO:0016791
Prci9g1878 886 Pfam Actin-fragmin kinase, catalytic 62 377 IPR015275 -
Prci9g1878 886 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 882 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci9g1878 886 SMART dsp_5 656 798 IPR020422 GO:0006470|GO:0008138
Prci9g1878 886 MobiDBLite consensus disorder prediction 498 527 - -
Prci9g1878 886 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 656 801 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1878 Prci-Chr9 30211529 30218409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1878 1 867 Protein tyrosine phosphatase (PTP) family AT5G23720 62.714 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1878 K14165 - gmx:100791993 1255.74