Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1876 ATGCTCTGGATTCTGATCTCTGAACACTCCAAAAGTGAAGAACCTCACTCATCTTCATCCAAGAGTCACCTTCAGGGCAGTGACGAAGAAGAGGAGCCTAAGATCACATTTCCTCTTGACGCTTCCGATCGGGTGCTGTTTATGTTGGGAGATATCACGTCAGGGCCTGCCATTAGCTTCACCGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCTCGCCCCACCGCCATACGAGGCCACTTGACACTATGCCTGCTTCTAGCCCTGGAGAAGCAAAATGTGATACCCTTCATGAGGAAACAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCCATGCTGGATGTTGAATCAAGCTCCTCTTCCTGGGATAGGCTATCTTCAGTGCATCATGTTGAATACAGCAGCAGCAATGACTATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTCTTCTTCGCCTTTTTCCGTCACTTTGGAAATGATGATACTCTTCCAAAGGAGGCAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGATTGTGAATTTGCCAAGTGGTTGGGAGTTCGAACCCCACAGGGTAGAGTGATTCATAATACTAGTCTTGAATGGCTCCAAATAAAGGATGCAGCAGAAAATGCAAGAGCTGCAGCTGATTCTGAAGGAGATGAAGCTGGTAACATGACATGCACAGAGCTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTATGTGCATGGGTCACCTTTACTTGAAAGTTCTAGTGCATTCGAGTACCAAGAGTCAGTAGAAAGAACATCAGCAGCTCTTGGCAAGGTGTTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGGTTATCTCTGCGAATACTGATACACTAGAGGAAGCTTTTGATTCTGCAATGCATCTATATAGACCAAGGGTGATCAGGACACTTCAAAAAGAAAGAAGGTCAACTTCATCAGATAGCAGATTGAGTTCTCATAACCCTGGACTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTGTCTAACATAAGCCTTCAAAGCTACACATCAAGTGAAGCACTCTTTACTGACTTAAACATTGTGGCTATTGATTCTGGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTTGCCTCCAACCTCTTGCATGATATAACTGGAGGTAAATTAGGATCTCCTTTGCCAGAAGTCCCAAATTCAACAACTGATGTTCATTCAAATGACATGACATCAGCAGTTCATGCATTCCGTACTGGTTTTCGTGCCGCTCTTAGGGATCTGCAGGGATTTCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTCGTTAAGATCATTTATGAACATTATGAGCAAATTATCAACGGGGGAATTTGACAAATATGATTCATTGGTTTCACCTGACACCACTTCACAGGCAGCTGGAGGTGGTAACTGTTCCTCTCCATCAAGTAAAGAGAGATCTGTTAATGATAACCTTCCAGATTGTGATTCAGAACTACAGAAAACATATCAAAGGGCATCCTGTTCTGGCAGTAGAGATGATTCTGAATTTTCTGCCTTGACGAGAGAGGGTTGGCATGGAAAGTTTTGTAAAGGAAGCGGGGAACCACTACGAAGTCTCCGCTTGACGGCGAAGCTCCGTGACTTCCATAAGTTTGCAAAGGTCGATGCAGAGTCTAACAGAGAATTAGAACAGTGGAATGAAATGCTTAAAAATGATGCTGTCAGGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGTAGTGATAATTACTGTGTCATTGATGCTTACGAACTGAAGGTCAGACTTGAGCATATTCTTGAGCGAATTGCATTGATATCTGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTTGCAAATAATCTGTTCATAGGTGGAGCACTCGCTGCAAGGTCTTTGTACACACTTCAACAATTGGGAATCACACATATTATGTGTTTGTGCACGAATGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTCGTATGCGATGACGAAGATTCTAACATTAATAGCATATTTGAAGAAGCTTGTGATCTAATAAGTTATGTTGAGGAAGCAGGTCATAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAAATGCACCTTACTTGAAGCATGGAATGCAATGAAACGGGTCCACCGGCGAGCTCAGCCGAACGATGGTTTTGCGAAGATCTTAATGGAACTGGATCAGAAACTGCATGGAAAAATGTCCATGGTGTGGCAGCAAAGGAAACCGACGATGAAAATTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGTTCTCTTAAGCTGCATCTGCAGAAATCGCACAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTGGCAGCTTTGAAGATTAGTCGTGGTGGAAGCGTCAGCCCTAAACAGAGGCAGTCTCATTCAATTATGGATGAACGGAGACCGTAG 2802 0.4336 MLWILISEHSKSEEPHSSSSKSHLQGSDEEEEPKITFPLDASDRVLFMLGDITSGPAISFTEWLDLVRKRTAMYRSSGSPHRHTRPLDTMPASSPGEAKCDTLHEETTEINLSERLGKAAMLDVESSSSSWDRLSSVHHVEYSSSNDYSEDDMNKPLEVTVHSGGVVFFAFFRHFGNDDTLPKEAAAVIKISSTRMATQSERLDCEFAKWLGVRTPQGRVIHNTSLEWLQIKDAAENARAAADSEGDEAGNMTCTELLEALELSRCLFFMGYVHGSPLLESSSAFEYQESVERTSAALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKVISANTDTLEEAFDSAMHLYRPRVIRTLQKERRSTSSDSRLSSHNPGLVSQVSDISEMAESPRLSNISLQSYTSSEALFTDLNIVAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGSPLPEVPNSTTDVHSNDMTSAVHAFRTGFRAALRDLQGFHIFLLTLHQKLDSSLRSFMNIMSKLSTGEFDKYDSLVSPDTTSQAAGGGNCSSPSSKERSVNDNLPDCDSELQKTYQRASCSGSRDDSEFSALTREGWHGKFCKGSGEPLRSLRLTAKLRDFHKFAKVDAESNRELEQWNEMLKNDAVRLCQENNFNTGFFEGSDNYCVIDAYELKVRLEHILERIALISEAANSEKPSRVANNLFIGGALAARSLYTLQQLGITHIMCLCTNEIGQSDSQFPDLFAYKNFFVCDDEDSNINSIFEEACDLISYVEEAGHRILVHCFEGKSRSVTLVLAYLMLRKKCTLLEAWNAMKRVHRRAQPNDGFAKILMELDQKLHGKMSMVWQQRKPTMKICPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPKQRQSHSIMDERRP 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1876 933 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 772 824 IPR000387 GO:0016311|GO:0016791
Prci9g1876 933 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 29 929 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci9g1876 933 MobiDBLite consensus disorder prediction 75 99 - -
Prci9g1876 933 Pfam Actin-fragmin kinase, catalytic 109 424 IPR015275 -
Prci9g1876 933 Pfam Dual specificity phosphatase, catalytic domain 713 844 IPR000340 GO:0008138|GO:0016311
Prci9g1876 933 MobiDBLite consensus disorder prediction 9 32 - -
Prci9g1876 933 SMART dsp_5 703 845 IPR020422 GO:0006470|GO:0008138
Prci9g1876 933 MobiDBLite consensus disorder prediction 545 573 - -
Prci9g1876 933 FunFam Dual specificity protein phosphatase PHS1 675 849 - -
Prci9g1876 933 ProSiteProfiles Dual specificity protein phosphatase domain profile. 703 848 IPR020422 GO:0006470|GO:0008138
Prci9g1876 933 MobiDBLite consensus disorder prediction 8 32 - -
Prci9g1876 933 MobiDBLite consensus disorder prediction 912 933 - -
Prci9g1876 933 Gene3D - 278 407 IPR036940 -
Prci9g1876 933 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 703 848 IPR029021 -
Prci9g1876 933 Gene3D Protein tyrosine phosphatase superfamily 682 849 IPR029021 -
Prci9g1876 933 CDD DSP 704 841 - -
Prci9g1876 933 SUPERFAMILY Protein kinase-like (PK-like) 62 438 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1876 Prci-Chr9 30211529 30220349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1876 28 914 Protein tyrosine phosphatase (PTP) family AT5G23720 62.319 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1876 K14165 - gmx:100791993 1269.99