Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1875 ATGCTCTGGATTCTGATCTCTGAACACTCCAAAAGTGAAGAACCTCACTCATCTTCATCCAAGAGTCACCTTCAGGGCAGTGACGAAGAAGAGGAGCCTAAGATCACATTTCCTCTTGACGCTTCCGATCGGGTGCTGTTTATGTTGGGAGATATCACGTCAGGGCCTGCCATTAGCTTCACCGAATGGCTGGACTTGGTCCGCAAAAGAACCGCCATGTATCGCTCCTCTGGCTCGCCCCACCGCCATACGAGGCCACTTGACACTATGCCTGCTTCTAGCCCTGGAGAAGCAAAATGTGATACCCTTCATGAGGAAACAACAGAAATCAATTTGTCAGAAAGGCTTGGTAAAGCTGCCATGCTGGATGTTGAATCAAGCTCCTCTTCCTGGGATAGGCTATCTTCAGTGCATCATGTTGAATACAGCAGCAGCAATGACTATTCTGAGGACGACATGAACAAACCTCTTGAGGTAACTGTACATTCTGGGGGAGTTGTCTTCTTCGCCTTTTTCCGTCACTTTGGAAATGATGATACTCTTCCAAAGGAGGCAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGATTGTGAATTTGCCAAGTGGTTGGGAGTTCGAACCCCACAGGGTAGAGTGATTCATAATACTAGTCTTGAATGGCTCCAAATAAAGGATGCAGCAGAAAATGCAAGAGCTGCAGCTGATTCTGAAGGAGATGAAGCTGGTAACATGACATGCACAGAGCTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTATGTGCATGGGTCACCTTTACTTGAAAGTTCTAGTGCATTCGAGTACCAAGAGTCAGTAGAAAGAACATCAGCAGCTCTTGGCAAGGTGTTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCCTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGACTGAAAAGGTTATCTCTGCGAATACTGATACACTAGAGGAAGCTTTTGATTCTGCAATGCATCTATATAGACCAAGGGTGATCAGGACACTTCAAAAAGAAAGAAGGTCAACTTCATCAGATAGCAGATTGAGTTCTCATAACCCTGGACTGGTATCACAGGTTTCTGATATTTCAGAGATGGCCGAATCACCAAGATTGTCTAACATAAGCCTTCAAAGCTACACATCAAGTGAAGCACTCTTTACTGACTTAAACATTGTGGCTATTGATTCTGGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATTTATCCTAAACTGGTTGAGTTAGTGCTCAATAGTTCTGAGTTTGCCTCCAACCTCTTGCATGATATAACTGGAGGTAAATTAGGATCTCCTTTGCCAGAAGTCCCAAATTCAACAACTGATGTTCATTCAAATGACATGACATCAGCAGTTCATGCATTCCGTACTGGTTTTCGTGCCGCTCTTAGGGATCTGCAGGGATTTCATATCTTCCTATTAACACTTCACCAGAAGCTTGATAGCTCGTTAAGATCATTTATGAACATTATGAGCAAATTATCAACGGGGGAATTTGACAAATATGATTCATTGGTTTCACCTGACACCACTTCACAGGCAGCTGGAGGTGGTAACTGTTCCTCTCCATCAAGTAAAGAGAGATCTGTTAATGATAACCTTCCAGATTGTGATTCAGAACTACAGAAAACATATCAAAGGGCATCCTGTTCTGGCAGTAGAGATGATTCTGAATTTTCTGCCTTGACGAGAGAGGGTTGGCATGGAAAGTTTTGTAAAGGAAGCGGGGAACCACTACGAAGTCTCCGCTTGACGGCGAAGCTCCGTGACTTCCATAAGTTTGCAAAGGTCAGACTTGAGCATATTCTTGAGCGAATTGCATTGATATCTGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTTGCAAATAATCTGTTCATAGGTGGAGCACTCGCTGCAAGGTCTTTGTACACACTTCAACAATTGGGAATCACACATATTATGTGTTTGTGCACGAATGAAATAGGACAATCAGATTCTCAATTTCCTGATCTATTTGCATACAAAAATTTCTTCGTATGCGATGACGAAGATTCTAACATTAATAGCATATTTGAAGAAGCTTGTGATCTAATAAGTTATGTTGAGGAAGCAGGTCATAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAAATGCACCTTACTTGAAGCATGGAATGCAATGAAACGGGTCCACCGGCGAGCTCAGCCGAACGATGGTTTTGCGAAGATCTTAATGGAACTGGATCAGAAACTGCATGGAAAAATGTCCATGGTGTGGCAGCAAAGGAAACCGACGATGAAAATTTGCCCTATCTGTGGAAAGAATGTAGGACTAAGCAGCAGTTCTCTTAAGCTGCATCTGCAGAAATCGCACAGAAGACTATCATCAGGGAGTGTAGATAGTGGCATGAAAATGGAGATTGAGAAAGCTTTGGCAGCTTTGAAGATTAGTCGTGGTGGAAGCGTCAGCCCTAAACAGAGGCAGTCTCATTCAATTATGGATGAACGGAGACCGTAG 2655 0.4365 MLWILISEHSKSEEPHSSSSKSHLQGSDEEEEPKITFPLDASDRVLFMLGDITSGPAISFTEWLDLVRKRTAMYRSSGSPHRHTRPLDTMPASSPGEAKCDTLHEETTEINLSERLGKAAMLDVESSSSSWDRLSSVHHVEYSSSNDYSEDDMNKPLEVTVHSGGVVFFAFFRHFGNDDTLPKEAAAVIKISSTRMATQSERLDCEFAKWLGVRTPQGRVIHNTSLEWLQIKDAAENARAAADSEGDEAGNMTCTELLEALELSRCLFFMGYVHGSPLLESSSAFEYQESVERTSAALGKVLMLDLVIRNEDRLPCRELRWRGNSANLLLTEKVISANTDTLEEAFDSAMHLYRPRVIRTLQKERRSTSSDSRLSSHNPGLVSQVSDISEMAESPRLSNISLQSYTSSEALFTDLNIVAIDSGVPRRPPAGKRAIDQAIYPKLVELVLNSSEFASNLLHDITGGKLGSPLPEVPNSTTDVHSNDMTSAVHAFRTGFRAALRDLQGFHIFLLTLHQKLDSSLRSFMNIMSKLSTGEFDKYDSLVSPDTTSQAAGGGNCSSPSSKERSVNDNLPDCDSELQKTYQRASCSGSRDDSEFSALTREGWHGKFCKGSGEPLRSLRLTAKLRDFHKFAKVRLEHILERIALISEAANSEKPSRVANNLFIGGALAARSLYTLQQLGITHIMCLCTNEIGQSDSQFPDLFAYKNFFVCDDEDSNINSIFEEACDLISYVEEAGHRILVHCFEGKSRSVTLVLAYLMLRKKCTLLEAWNAMKRVHRRAQPNDGFAKILMELDQKLHGKMSMVWQQRKPTMKICPICGKNVGLSSSSLKLHLQKSHRRLSSGSVDSGMKMEIEKALAALKISRGGSVSPKQRQSHSIMDERRP 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1875 884 ProSiteProfiles Dual specificity protein phosphatase domain profile. 654 799 IPR020422 GO:0006470|GO:0008138
Prci9g1875 884 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 654 799 IPR029021 -
Prci9g1875 884 Pfam Actin-fragmin kinase, catalytic 109 424 IPR015275 -
Prci9g1875 884 Gene3D Protein tyrosine phosphatase superfamily 629 800 IPR029021 -
Prci9g1875 884 MobiDBLite consensus disorder prediction 75 99 - -
Prci9g1875 884 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 29 634 IPR035010 GO:0004721|GO:0009737|GO:0043622
Prci9g1875 884 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 723 775 IPR000387 GO:0016311|GO:0016791
Prci9g1875 884 MobiDBLite consensus disorder prediction 9 32 - -
Prci9g1875 884 SMART dsp_5 654 796 IPR020422 GO:0006470|GO:0008138
Prci9g1875 884 MobiDBLite consensus disorder prediction 545 573 - -
Prci9g1875 884 Pfam Dual specificity phosphatase, catalytic domain 664 795 IPR000340 GO:0008138|GO:0016311
Prci9g1875 884 SUPERFAMILY Protein kinase-like (PK-like) 62 438 IPR011009 -
Prci9g1875 884 MobiDBLite consensus disorder prediction 8 32 - -
Prci9g1875 884 Gene3D - 278 531 IPR036940 -
Prci9g1875 884 CDD DSP 655 792 - -
Prci9g1875 884 FunFam Dual specificity protein phosphatase PHS1 628 800 - -
Prci9g1875 884 MobiDBLite consensus disorder prediction 863 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1875 Prci-Chr9 30211529 30220349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1875 28 865 Protein tyrosine phosphatase (PTP) family AT5G23720 58.305 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1875 K14165 - gmx:100791993 1157.13