Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci9g1873 | ATGCCAAAAGTTCTACAAAGGATGTCGGAAGTACACGTCTTGGAGAGGGATATGATGGGGACATTGCTTTTGCAAGTGCCCTCGAAACTTTTGGGGGAGGGCACTGTGATCCACTCTTTGTTGCTTTGGGAGGTTGAGCACATGCTTAATGACCGGTTGCTACACATTCTCAATGTTGACATCCAAGATGTTAAGGAAGCTCGAAAGCGATTTGACAAAGCTTCTCTTGTATATGATCAGGCACGTGATAAATTTCTGTCATTGAGAAAGAGCACTAGGATGGATATTGCTAGTGCCATCGAAGAGGAATGGCACATTGCAAGAGATTCATTTGAGGAAGCCCGTTGCAATCTGGTTAGTGCTCTAAATAATGTTGAGGCCAAGAAGAGATTTGAATTTTTGGAGGCTGTCAGTGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTATTGCATCAGATGGAACCTTTCATTACTGAGGTTTTGGCTTATGCACAGCAGTCAAGAGAAAGTTACAATACGGATCAGATCTCTCTAAATGAAAAAATGCAAGAGTACAAAAGACAAATTCATCAAGAAAGTAGATTGTCTTTAAATGGTCCCAATGGTTCTCCTGGAGACTGTGTACAGCCTTTTTCTAGGATATCAAATGAAGTGGTAGATGCAGTAAAAGAATCTGCTGCAAATGGGAAGGTTCAAATTATTCGGCAAGGATTTCTTTCAAAACGCTCATCCAATCTGAGGGGTGACTGGAAGAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGCTGTTCTATTATCGCAAACCATGGAACTGGTCTCATAGCAGCAATCTACCATCTGTACAGAGAAATAATGCCACTGAAAATGGCTCTGGAATTCTGAGCCGGTGGCTTTCTTCTCATTATCATGGGGGTGTCCATGATGAACGATCTGTGGCACGTCATGCAGTGAACCTGCTTACATCAACAATTAAGGTTGATGCTGATCAGACAGATCTAAGATTTTGCTTCCGGATTATTTCACCAGTAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATTGAAAAAATGACAGGAGTAATTGCTTCCTTGTTGAGTGTTCAGTCGGTAGAAATGCCTCTCACAGCTGACTCTGAAAGTGGTGGCTGTTCCTCTTCAAGTAAGATTGATATGCTGGAAAACTTTCAAGACGATGATCAACCAATGAGTAAGGAGTGTGCATCCAAGAACATCACTTCAAATAATCATTTGCGTGAATATAAAAGTTTTCAGTTGCATAAACAGAGTATTAGAGGTGAAAAACCAATTGATGTTCTTAGAAGGGTAGGTGGAAATGAGAGATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCTTAAACCTCGGTATTCTCATATGCATAGAGTGTTCTGGCATTCATCGTAATCTTGGTGTACATATATCAAAAGTAAGATCACTGACTCTTGATGTGAAAGTCTGGGACCCTTCTGTCCTAACTATGTTTCAGTCACTGGGCAATCATTTTGCAAACTCAGTTTGGGAAGAAACATTGAATTCAGCAAGTGAAATGCAAGCTGATGATGCAAATGTTGAAAACAGATTATTCCGCGTGAGGAAACCAGAACATGATGATTCTATCTCATTAAAAGAGAGGTTCATTCATGCAAAGTATTCTGAGAAAATCTTTGTCGATCAGATAAAGGATAACAACCATCTCCTTTCAGTGGCGCAACAACTGTGGGAAAGTGTTTGCGCCAATGATAAGAAAGCAGTGTACCAGTATATTGTGAAGTCTGATCTGGATGTCAATGCTGTCTGTGGGCAAGAATATTTTGATGACGCTTTTGACATGCCTTCAAGCAATTCAAAATCTTCAGCCAAGAGTGAAAACCAACCAATAGAGGATATACTTGATGGTTCTACTGTGCTTCACCTGGCATGCCTGACTGCTGACATTGCCATGGTGGAGCTGCTCTTACAATATGGCGCAGACATTAATGCATCCGATTCAAGAGGTCGCACACCACTGCATTACTGTATTATCAGAGGGAAGAATGCAACTGCAAAATTGCTTCTGATAAGAGGGGCGAATCCACATGCGGCAGATGATGAAGGCAATACTCCTCTTAAACTTGCATCAGAATCCGCTTCTATTAGCAATGATGTTCTCGCCCTCATTACAAGATGA | 2226 | 0.4128 | MPKVLQRMSEVHVLERDMMGTLLLQVPSKLLGEGTVIHSLLLWEVEHMLNDRLLHILNVDIQDVKEARKRFDKASLVYDQARDKFLSLRKSTRMDIASAIEEEWHIARDSFEEARCNLVSALNNVEAKKRFEFLEAVSGIMDAHLRYFQQGYQLLHQMEPFITEVLAYAQQSRESYNTDQISLNEKMQEYKRQIHQESRLSLNGPNGSPGDCVQPFSRISNEVVDAVKESAANGKVQIIRQGFLSKRSSNLRGDWKRRYFVLDSRGMLFYYRKPWNWSHSSNLPSVQRNNATENGSGILSRWLSSHYHGGVHDERSVARHAVNLLTSTIKVDADQTDLRFCFRIISPVKNYTLQAENAVDQMDWIEKMTGVIASLLSVQSVEMPLTADSESGGCSSSSKIDMLENFQDDDQPMSKECASKNITSNNHLREYKSFQLHKQSIRGEKPIDVLRRVGGNERCADCGKPEPDWASLNLGILICIECSGIHRNLGVHISKVRSLTLDVKVWDPSVLTMFQSLGNHFANSVWEETLNSASEMQADDANVENRLFRVRKPEHDDSISLKERFIHAKYSEKIFVDQIKDNNHLLSVAQQLWESVCANDKKAVYQYIVKSDLDVNAVCGQEYFDDAFDMPSSNSKSSAKSENQPIEDILDGSTVLHLACLTADIAMVELLLQYGADINASDSRGRTPLHYCIIRGKNATAKLLLIRGANPHAADDEGNTPLKLASESASISNDVLALITR | 741 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci9g1873 | 741 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 3 | 197 | IPR027267 | - | |
Prci9g1873 | 741 | Pfam | Putative GTPase activating protein for Arf | 447 | 577 | IPR001164 | GO:0005096 | |
Prci9g1873 | 741 | SUPERFAMILY | BAR/IMD domain-like | 16 | 260 | IPR027267 | - | |
Prci9g1873 | 741 | CDD | ArfGap | 447 | 570 | - | - | |
Prci9g1873 | 741 | ProSiteProfiles | PH domain profile. | 237 | 373 | IPR001849 | - | |
Prci9g1873 | 741 | Pfam | BAR domain of APPL family | 24 | 178 | IPR004148 | GO:0005515|GO:0005737 | |
Prci9g1873 | 741 | ProSiteProfiles | Ankyrin repeat region circular profile. | 684 | 716 | - | - | |
Prci9g1873 | 741 | Coils | Coil | 64 | 84 | - | - | |
Prci9g1873 | 741 | SMART | arf_gap_3 | 444 | 583 | IPR001164 | GO:0005096 | |
Prci9g1873 | 741 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD1 | 426 | 584 | - | - | |
Prci9g1873 | 741 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 444 | 577 | IPR037278 | - | |
Prci9g1873 | 741 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 444 | 583 | IPR001164 | GO:0005096 | |
Prci9g1873 | 741 | ProSiteProfiles | Ankyrin repeat profile. | 684 | 716 | IPR002110 | GO:0005515 | |
Prci9g1873 | 741 | ProSiteProfiles | Ankyrin repeat region circular profile. | 651 | 682 | - | - | |
Prci9g1873 | 741 | Gene3D | - | 230 | 383 | IPR011993 | - | |
Prci9g1873 | 741 | CDD | PH_ACAP | 240 | 377 | - | - | |
Prci9g1873 | 741 | Pfam | Ankyrin repeats (3 copies) | 656 | 739 | IPR002110 | GO:0005515 | |
Prci9g1873 | 741 | Coils | Coil | 173 | 193 | - | - | |
Prci9g1873 | 741 | PRINTS | HIV Rev interacting protein signature | 456 | 475 | IPR001164 | GO:0005096 | |
Prci9g1873 | 741 | PRINTS | HIV Rev interacting protein signature | 475 | 492 | IPR001164 | GO:0005096 | |
Prci9g1873 | 741 | PRINTS | HIV Rev interacting protein signature | 498 | 519 | IPR001164 | GO:0005096 | |
Prci9g1873 | 741 | ProSiteProfiles | Ankyrin repeat profile. | 651 | 683 | IPR002110 | GO:0005515 | |
Prci9g1873 | 741 | SMART | ANK_2a | 684 | 713 | IPR002110 | GO:0005515 | |
Prci9g1873 | 741 | SMART | ANK_2a | 651 | 680 | IPR002110 | GO:0005515 | |
Prci9g1873 | 741 | Gene3D | Arf GTPase activating protein | 424 | 584 | IPR038508 | - | |
Prci9g1873 | 741 | SMART | PH_update | 238 | 375 | IPR001849 | - | |
Prci9g1873 | 741 | PANTHER | CENTAURIN/ARF | 33 | 738 | IPR045258 | GO:0005096 | |
Prci9g1873 | 741 | Pfam | PH domain | 239 | 369 | IPR001849 | - | |
Prci9g1873 | 741 | SUPERFAMILY | Ankyrin repeat | 596 | 728 | IPR036770 | - | |
Prci9g1873 | 741 | Gene3D | - | 588 | 740 | IPR036770 | - | |
Prci9g1873 | 741 | SUPERFAMILY | PH domain-like | 149 | 372 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci9g1873 | Prci-Chr9 | 30185328 | 30194431 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci9g1873 | 443 | 576 | C2H2 Transcription Factor Family | AT4G21160 | 39.259 | 9.10e-22 | 95.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci9g1873 | K12489 | - | gmx:100792517 | 970.304 |