Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1833 ATGGAGTGGAATTTGAAGGGTGGCTCCTGGGACTTGACGGAGTTAGATGGAGGAGGAGGCCTGCCCAACATAGAAACAACGGTCGATAATTATTACTGGTCGAGCACACTCGGATCAGTGAACCCGAGTGGCGGGGAATTTTGTGTCGATTTGAAGCTGGGTCGGGTCGGGAATTCTGGCACCGAAGGCTCAGGGCCCAAGTGGAAAGTTGCGGCCGCAGCATCAAAAACGGCATCCTCCGCTGCTTCAGGATCATCGAAGAGGGCTCGAGCAATTCAGAACGGGACCCAAACGGCGTCGTGCCTCGTGGATGGGTGCAGTTCAGATCTCAGTAACTGCAGGGAGTACCATAGGCGTCACAAGGTGTGCGAACTCCATTCCAAGACTCCTGTGGTCACCATTGGCGGCCAAAAGCAAAGGTTCTGCCAACAGTGTAGCAGGTTCCATTCCCTGGAAGAATTTGATGAAGGGAAGAGAAGCTGCAGGAAGCGATTGGACGGGCACAACCGACGGAGAAGAAAGCCCCAGCCAGTGCCTCTTACTCGTTCTGCTGCTTTATTCTCCAATTACCAAGGGAGGCAGTTAGTATCCTTGACATCATCGGACTCAAATCTGTATCCTTCCGGTGCTATGGTGAACCCTGGTTGGGAATGGGAATGGGATGGTAGGGCGGTGGTACGTAGCAATAGTAAGCAGCAGCTATATCTCGGGTCTTCTGAGAGCACCAGAATGAAGCATCATGAGAAGCCATGTGTTGAAGCTGCTTCTGCGTGCCACACGCTTCTGATGAGGATGACGGCCTCATCAGCGGAGGAGTCTCCTCCCCCTCCCCGTGCTCTCTCTCTTCTGTCATCACCGGCGCCGACGCACGCACCCATATACCTGTCACAGCAGCCTCTAGGCCCCACCAGCCATGAGGCTGTGGACGCTACGCCTCTGGTTAACAATGGGACTCATCTTTATGTGTATAACTCGTTCGGGTCTGATGCGTCCCAGGGGTTCCATACTTCCCAGTCACTCCCATTTCATTGGGAATAA 1038 0.5385 MEWNLKGGSWDLTELDGGGGLPNIETTVDNYYWSSTLGSVNPSGGEFCVDLKLGRVGNSGTEGSGPKWKVAAAASKTASSAASGSSKRARAIQNGTQTASCLVDGCSSDLSNCREYHRRHKVCELHSKTPVVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPVPLTRSAALFSNYQGRQLVSLTSSDSNLYPSGAMVNPGWEWEWDGRAVVRSNSKQQLYLGSSESTRMKHHEKPCVEAASACHTLLMRMTASSAEESPPPPRALSLLSSPAPTHAPIYLSQQPLGPTSHEAVDATPLVNNGTHLYVYNSFGSDASQGFHTSQSLPFHWE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1833 345 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 54 317 IPR044817 GO:0003677
Prci9g1833 345 Pfam SBP domain 101 174 IPR004333 GO:0003677
Prci9g1833 345 Gene3D - 91 162 IPR036893 GO:0003677|GO:0005634
Prci9g1833 345 SUPERFAMILY SBT domain 100 177 IPR036893 GO:0003677|GO:0005634
Prci9g1833 345 ProSiteProfiles Zinc finger SBP-type profile. 98 175 IPR004333 GO:0003677
Prci9g1833 345 FunFam Squamosa promoter-binding-like protein 14 92 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1833 Prci-Chr9 30004831 30007038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1833 1 345 SBP-box Gene Family AT5G50670 41.799 6.08e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci9g1833 SBP 4.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1833 - - pcin:129320715 674.47