Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1820 ATGGAGAACAACCAGCAAGCCCAGTCGTCCTCGTACCCCCCTCAAACCCCTGCTGCTCCTCCCCCTTTCCACCACCTTCTCCAGCAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCTTACCAGCGACAAGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGAATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCTGCCGAGGCTCCCATTTTGTTTGCCAAGGCCTGCGAGCTTTTCATCCTCGAGCTCACCATACGGTCGTGGCTTCACGCCGAGGAGAACAAGAGGAGGACCCTCCAGAAGAACGACATAGCCGCTGCCATCACCAGGACCGACATCTTCGATTTCTTGGTCGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATTGTGGGCACCACGGCCAGCGGTGTCCCTTATTATTATCCTCCCATGGGCCAACCTGCTGGCCCCCCCGGAGGCATGATTATTGGACGGCCGGCGGTGGATCCCACTGGGGTGTACGTGCAGCCCCCCTCGCAGGCTTGGCAGTCGGTATGGCAGACCGCTGCTGAGGATGGATCATACGGTAGCGGCGGCAACAGTGGACAGGGCAACCTTGATGGTCCGAGTTGA 660 0.5818 MENNQQAQSSSYPPQTPAAPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAAEDGSYGSGGNSGQGNLDGPS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1820 219 Gene3D Histone, subunit A 23 133 IPR009072 GO:0046982
Prci9g1820 219 MobiDBLite consensus disorder prediction 1 23 - -
Prci9g1820 219 Pfam Core histone H2A/H2B/H3/H4 26 118 IPR007125 GO:0003677
Prci9g1820 219 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 28 151 - -
Prci9g1820 219 FunFam Nuclear transcription factor Y subunit gamma 24 133 - -
Prci9g1820 219 MobiDBLite consensus disorder prediction 196 219 - -
Prci9g1820 219 SUPERFAMILY Histone-fold 24 127 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1820 Prci-Chr9 29942656 29947566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1820 23 202 CCAAT-HAP5 Transcription Factor Family AT3G48590 89.071 3.64e-109 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci9g1820 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1820 - - pcin:129320575 380.178