Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1796 ATGATCTCGCCCTCTCTCCTCTCTGAACGCTCCACGGTCAACGCCGTCTTCATTGCCATGGCAAACCAATCCCAGGCGAAGCCTAGCCTTGCCGTCGACCCGAACTCCGGCTTTTGCCTTCTAACCAGAACATTCCATAGCCTCCGTCCTGACCACCCCGTTCCTCCTCTCTCTCAACCTCTCTCCATCGCCGACTACGCATGCTCTCTCCTCCCCACCTCCGTCTCGTCCACCACCGTCCTCATCGACTCCGTCACCGGCCGCCTCCTGTCCTACTCCCTCTTCCTTCGCCAAGTCAAAAACCTCGCTTCCTCCCTCGTTTCCCTCGCCCCTCTTTCCAAAGGCCACGTCGCCTTCATTCTCTCCCCTTCTTCTTTGCACATTCCCGTTCTCTATTTCTCTCTCTTGTCTCTCGGAGTCATCGTCTCACCCGCTAACCCGCTGAGCTCTGACTCGGAGGTAGCTCACCAGGTTCAACTCGTTCAACCCGTTATCGCATTCGCCACCTCGTCTACTGCCCACAAGATCCCAAACCTTCAATACGGTACCATATTGCTCGACTCGCCTCAGTTCCTTTCCATGATTGACGGACTCCCCGGAAATGTTAACAGCGGAAGCGGCACAGTTGAGGTGAGTCAATCTGATACGGCGGCGATTCTATTCTCTTCGGGAACCACAGGCCGAGTCAAGGGAGCTTTGTTGACTCACGGGAATTTTATTTCGGTAATCAGTGGGCTGCATTACACGAGGCACCTGAATAGCAATGATGAAGCACGCCGTGTGTACTTGTTCCCATTGCCTCTGTTTCACGTGTTTGGTTTTTTCGCGCTGATTTCGTCCGTGGCAGCAGGGGATACGGTGGTTTTGATGCGGAGGTTCGATTTCGGAGAGATGTTGAAGGCGGTAGAGAGATACAAAATTACTACCATGCCGGTGTCGCCCCCGCTTGTGGTGGCGCTGACTAAGTCGGAGTTTGCCAGCAAGTACGACCTTAGCTCGCTTCGGTTTCTGGGATGCGGCGGCGCCCCTCTTGGCAAAGAAGTGGCTGAAAACTTCAAAGTCAAATTCCCCAACGTGGAAATTAGCGAAGGCTATGGTTTGACTGAGAGCTCAGGTTTAGCAACGAGAATGATAGGGCCTGAGGAGACAAAGCGTCACGGTTCAGTGGGTCGACTAGAAAAGAATTTTGAAGCCAAAATAGTGGATTCTGTGTCTGGAGAAGCATTGCCTCCTGGAAAGAAAGGAGAATTATGGTTGCGAGGTCCTACAATTATGAAAGGTTATGTGGCAGATGAGACGGCCACCACTGACACATTGGATTCAGAAGGATGGCTCAAGACTGGTGATCTTTGTTACTTTGACTCCCATGGCTTCCTCTTTATTGTCGACAGGATAAAGGAGCTGATTAAATACAAAGCATACCAGGTTCCCCCAGCTGAGTTGGAACTTCTACTTCTCTCACATCCTGAAATTGCCGATGCTGCTGTAATTCCTTATCCAGATGAAGATGCAGGGCAGATACCAATGGCTTTTGTGGTAAGAAAATCTGGAAGCAATATTATTGCATCCGAGGTCATGGATTTCGTGGCAAAGCAGGTGGCGCCATACAAGAAAATAAGGCGACTATCATTTGTGAATAATATCCCAAAATCTGCATCAGGTAAAATATTGAGAAGGGAATTGGTTACTTATGCTCTGAATGGTAGTGTTTCCTCCAAATTGTGA 1725 0.5026 MISPSLLSERSTVNAVFIAMANQSQAKPSLAVDPNSGFCLLTRTFHSLRPDHPVPPLSQPLSIADYACSLLPTSVSSTTVLIDSVTGRLLSYSLFLRQVKNLASSLVSLAPLSKGHVAFILSPSSLHIPVLYFSLLSLGVIVSPANPLSSDSEVAHQVQLVQPVIAFATSSTAHKIPNLQYGTILLDSPQFLSMIDGLPGNVNSGSGTVEVSQSDTAAILFSSGTTGRVKGALLTHGNFISVISGLHYTRHLNSNDEARRVYLFPLPLFHVFGFFALISSVAAGDTVVLMRRFDFGEMLKAVERYKITTMPVSPPLVVALTKSEFASKYDLSSLRFLGCGGAPLGKEVAENFKVKFPNVEISEGYGLTESSGLATRMIGPEETKRHGSVGRLEKNFEAKIVDSVSGEALPPGKKGELWLRGPTIMKGYVADETATTDTLDSEGWLKTGDLCYFDSHGFLFIVDRIKELIKYKAYQVPPAELELLLLSHPEIADAAVIPYPDEDAGQIPMAFVVRKSGSNIIASEVMDFVAKQVAPYKKIRRLSFVNNIPKSASGKILRRELVTYALNGSVSSKL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1796 574 Gene3D - 49 466 IPR042099 -
Prci9g1796 574 CDD 4CL 50 561 - -
Prci9g1796 574 Pfam AMP-binding enzyme 79 471 IPR000873 -
Prci9g1796 574 Pfam AMP-binding enzyme C-terminal domain 480 555 IPR025110 -
Prci9g1796 574 ProSitePatterns Putative AMP-binding domain signature. 219 230 IPR020845 -
Prci9g1796 574 Gene3D - 467 567 IPR045851 -
Prci9g1796 574 FunFam 4-coumarate--CoA ligase 2 467 567 - -
Prci9g1796 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 40 562 - -
Prci9g1796 574 SUPERFAMILY Acetyl-CoA synthetase-like 86 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1796 Prci-Chr9 29795071 29798744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1796 24 571 Monolignol Biosynthesis Gene Families AT5G63380 58.289 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1796 K01904 - qsa:O6P43_022573 775.778