Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1795 ATGGCCAAACAAGTCGATCCAAGCTCTGGCTTTTGCTCTCAAACCAGAACATTCCACAGTCTTCGTCCTGACGTCCCTCTCCCTCCACCCTCTCAACCTCTTTCCATCACTGACTACGCTCTCTCTCTCATTCCTCCGACTGCTTCCTCCACCACAGTTCTCATCGATTCTGCCACCGACCGCCACATCTCCTACTCCCTCTTCCTTCACCAAATCAAAAACCTCGCCTCCTCTCTCGCTTCCCTCACCCCTCTTTCCAAAGGCCACGTCGCCTTCATTCTCTCTCCTGCTTCTCTTCACATCCCAGTTCTTTACTACTCCCTCTTGTCTTTAGGAGTCACCGTCTCACCCGCTAACCCTATCGGCTCTGATTCGGAGGTCGCTCACCAGGTTGAGCTCGCTCAACCTGTCATTGCATTTGCTACCTCCTCCACCGCTCACAAGATCCCTAAGCTCCGATACGGTACGGTCATAATCGACTCGCCTCAGTTCCTTTCCATGATCAATGGAACTTCCGGAAGTGGTAATGCTGATATCAGGGGCGACCGCAGAGTCATGATGAGCCAATCCGATCCGGCGGCGATTCTATTCTCATCTGGAACGACTGGAAGAGTGAAGGGCGTGTTATTGACCCATAGGAATTTGATTGCTCTAATTGGGGGATTTTACCACCTGAGGCATCTCATGGATTCGCAAGAGAATGAACCCGAGCCGGTGTCCCTATTCACGCTGCCGCTTTTCCACGTGTTTGGGTTTTTCATGCTGATTAGGGCGATGTCGATGGGGGAGACCCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGCATGTTAAAGGCGGTAGAAAGGTACAAGATTACATACATGCCAGTTTCGCCGCCGCTCATTGTGGCGCTGGCCAAGTCGGAGTTAGTGAACAAGTATGACCTTAGCTCGCTGAGGTTGCTGGGGTGCGGCGGCGCGCCGCTTGGCAAGGAGGTGGCTGAGAACTTCACTGCCAGATTCCCCGATGTGGAAATAGTGCAGGGGTATGGTCTGACTGAAAGTGGAGGAGGGGCAACGAGAATGATAGGGCCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGAATATGGAAGCCAAGATTGTGGATCCTGTGACTGGAGAGTCATTACCTCCTGGCCAGAAAGGGGAACTGTGGTTGAAAGGTCCAACAATAATGAAAGGTTATGTAAGAAACGAGGAAGCAACGGCTGAGACATTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGATGGTTTCCTCTACATTGTGGACAGGCTCAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTTGAACATATACTTCACACCCACCCTGACATTGCTGATGCTGCTGTAGTTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAAAAATATCAACGCAGATCAGGTTATGGATTTTGTGGCAAAGCAGGTTGCGCCATACAAGAAGATACGGCGTGTGGCTTTCATTAACGCTATTCCAAAGAACCCGGCTGGCAAAATTTTGAGAAGGGAATTAGTTGATTCTGCATTGTCAAGTGGTTCTTCCAAATTGTAG 1656 0.5012 MAKQVDPSSGFCSQTRTFHSLRPDVPLPPPSQPLSITDYALSLIPPTASSTTVLIDSATDRHISYSLFLHQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTVSPANPIGSDSEVAHQVELAQPVIAFATSSTAHKIPKLRYGTVIIDSPQFLSMINGTSGSGNADIRGDRRVMMSQSDPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMDSQENEPEPVSLFTLPLFHVFGFFMLIRAMSMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALAKSELVNKYDLSSLRLLGCGGAPLGKEVAENFTARFPDVEIVQGYGLTESGGGATRMIGPEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQKGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPDIADAAVVPYPDEEAGQIPMAFVVRKPGKNINADQVMDFVAKQVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALSSGSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1795 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Prci9g1795 551 Gene3D - 19 444 IPR042099 -
Prci9g1795 551 SUPERFAMILY Acetyl-CoA synthetase-like 58 543 - -
Prci9g1795 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Prci9g1795 551 CDD 4CL 49 539 - -
Prci9g1795 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Prci9g1795 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Prci9g1795 551 Gene3D - 445 545 IPR045851 -
Prci9g1795 551 Pfam AMP-binding enzyme 51 449 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1795 Prci-Chr9 29788090 29791539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1795 2 551 Monolignol Biosynthesis Gene Families AT5G63380 64.235 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1795 K01904 - qsa:O6P43_022573 876.7