Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1794 ATGGCCAAACAAGTCGATCCAAGCTCTGGCTTTTGCTCTCAAACCAGAACATTCCACAGTCTTCGTCCTGACGTCCCTCTCCCTCCACCCTCTCAACCTCTTTCCATCACTGACTACGCTCTCTCTCTCATTCCTCCGACTGCTTCCTCCACCACAGTTCTCATCGATTCTGCCACCGACCGCCACATCTCCTACTCCCTCTTCCTTCACCAAATCAAAAACCTCGCCTCCTCTCTCGCTTCCCTCACCCCTCTTTCCAAAGGCCACGTCGCCTTCATTCTCTCTCCTGCTTCTCTTCACATCCCAGTTCTTTACTACTCCCTCTTGTCTTTAGGAGTCACCGTCTCACCCGCTAACCCTATCGGCTCTGATTCGGAGGTCGCTCACCAGGTTGAGCTCGCTCAACCTGTCATTGCATTTGCTACCTCCTCCACCGCTCACAAGATCCCTAAGCTCCGATACGGTACGGTCATAATCGACTCGCCTCAGTTCCTTTCCATGATCAATGGAACTTCCGGAAGTGGTAATGCTGATATCAGGGGCGACCGCAGAGTCATGATGAGCCAATCCGATCCGGCGGCGATTCTATTCTCATCTGGAACGACTGGAAGAGTGAAGGGCGTGTTATTGACCCATAGGAATTTGATTGCTCTAATTGGGGGATTTTACCACCTGAGGCATCTCATGGATTCGCAAGAGAATGAACCCGAGCCGGTGTCCCTATTCACGCTGCCGCTTTTCCACGTGTTTGGGTTTTTCATGCTGATTAGGGCGATGTCGATGGGGGAGACCCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGCATGTTAAAGGCGGTAGAAAGGTACAAGATTACATACATGCCAGTTTCGCCGCCGCTCATTGTGGCGCTGGCCAAGTCGGAGTTAGTGAACAAGTATGACCTTAGCTCGCTGAGGTTGCTGGGGTGCGGCGGCGCGCCGCTTGGCAAGGAGGTGGCTGAGAACTTCACTGCCAGATTCCCCGATGTGGAAATAGTGCAGGGGTATGGTCTGACTGAAAGTGGAGGAGGGGCAACGAGAATGATAGGGCCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGAATATGGAAGCCAAGATTGTGGATCCTGTGACTGGAGAGTCATTACCTCCTGGCCAGAAAGGGGAACTGTGGTTGAAAGGTCCAACAATAATGAAAGGTTATGTAAGAAACGAGGAAGCAACGGCTGAGACATTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGATGGTTTCCTCTACATTGTGGACAGGCTCAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTTGAACATATACTTCACACCCACCCTGACATTGCTGATGCTGCTGTAGTTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAAAAATATCAACGCAGATCAGGTTGCGCCATACAAGAAGATACGGCGTGTGGCTTTCATTAACGCTATTCCAAAGAACCCGGCTGGCAAAATTTTGAGAAGGGAATTAGTTGATTCTGCATTGTCAAGTGGTTCTTCCAAATTGTAG 1632 0.5025 MAKQVDPSSGFCSQTRTFHSLRPDVPLPPPSQPLSITDYALSLIPPTASSTTVLIDSATDRHISYSLFLHQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTVSPANPIGSDSEVAHQVELAQPVIAFATSSTAHKIPKLRYGTVIIDSPQFLSMINGTSGSGNADIRGDRRVMMSQSDPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMDSQENEPEPVSLFTLPLFHVFGFFMLIRAMSMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALAKSELVNKYDLSSLRLLGCGGAPLGKEVAENFTARFPDVEIVQGYGLTESGGGATRMIGPEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQKGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPDIADAAVVPYPDEEAGQIPMAFVVRKPGKNINADQVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALSSGSSKL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1794 543 Gene3D - 19 444 IPR042099 -
Prci9g1794 543 CDD 4CL 49 531 - -
Prci9g1794 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 533 - -
Prci9g1794 543 SUPERFAMILY Acetyl-CoA synthetase-like 58 535 - -
Prci9g1794 543 Pfam AMP-binding enzyme 51 449 IPR000873 -
Prci9g1794 543 Pfam AMP-binding enzyme C-terminal domain 458 525 IPR025110 -
Prci9g1794 543 Gene3D - 445 537 IPR045851 -
Prci9g1794 543 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Prci9g1794 543 FunFam 4-coumarate--CoA ligase 2 445 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1794 Prci-Chr9 29788090 29791540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1794 2 543 Monolignol Biosynthesis Gene Families AT5G63380 63.345 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1794 K01904 - qsa:O6P43_022573 856.284