Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1793 ATGGCCAAACAAGTCGATCCAAGCTCTGGCTTTTGCTCTCAAACCAGAACATTCCACAGTCTTCGTCCTGACGTCCCTCTCCCTCCACCCTCTCAACCTCTTTCCATCACTGACTACGCTCTCTCTCTCATTCCTCCGACTGCTTCCTCCACCACAGTTCTCATCGATTCTGCCACCGACCGCCACATCTCCTACTCCCTCTTCCTTCACCAAATCAAAAACCTCGCCTCCTCTCTCGCTTCCCTCACCCCTCTTTCCAAAGGCCACGTCGCCTTCATTCTCTCTCCTGCTTCTCTTCACATCCCAGTTCTTTACTACTCCCTCTTGTCTTTAGGAGTCACCGTCTCACCCGCTAACCCTATCGGCTCTGATTCGGAGGTCGCTCACCAGGTTGAGCTCGCTCAACCTGTCATTGCATTTGCTACCTCCTCCACCGCTCACAAGATCCCTAAGCTCCGATACGGTACGGTCATAATCGACTCGCCTCAGTTCCTTTCCATGATCAATGGAACTTCCGGAAGTGGTAATGCTGATATCAGGGGCGACCGCAGAGTCATGATGAGCCAATCCGATCCGGCGGCGATTCTATTCTCATCTGGAACGACTGGAAGAGTGAAGGGCGTGTTATTGACCCATAGGAATTTGATTGCTCTAATTGGGGGATTTTACCACCTGAGGCATCTCATGGATTCGCAAGAGAATGAACCCGAGCCGGTGTCCCTATTCACGCTGCCGCTTTTCCACGTGTTTGGGTTTTTCATGCTGATTAGGGCGATGTCGATGGGGGAGACCCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGCATGTTAAAGGCGGTAGAAAGGTACAAGATTACATACATGCCAGTTTCGCCGCCGCTCATTGTGGCGCTGGCCAAGTCGGAGTTAGTGAACAAGTATGACCTTAGCTCGCTGAGGTTGCTGGGGTGCGGCGGCGCGCCGCTTGGCAAGGAGGTGGCTGAGAACTTCACTGCCAGATTCCCCGATGTGGAAATAGTGCAGGGGTATGGTCTGACTGAAAGTGGAGGAGGGGCAACGAGAATGATAGGGCCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGAATATGGAAGCCAAGATTGTGGATCCTGTGACTGGAGAGTCATTACCTCCTGGCCAGAAAGGGGAACTGTGGTTGAAAGGTCCAACAATAATGAAAGGTTATGTAAGAAACGAGGAAGCAACGGCTGAGACATTGGATCCGGAGGGATGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGATGGTTTCCTCTACATTGTGGACAGGCTCAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTTGAACATATACTTCACACCCACCCTGACATTGCTGATGCTGCTGTAGTTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCCTTTGTGGTTGCGCCATACAAGAAGATACGGCGTGTGGCTTTCATTAACGCTATTCCAAAGAACCCGGCTGGCAAAATTTTGAGAAGGGAATTAGTTGATTCTGCATTGTCAAGTGGTTCTTCCAAATTGTAG 1596 0.505 MAKQVDPSSGFCSQTRTFHSLRPDVPLPPPSQPLSITDYALSLIPPTASSTTVLIDSATDRHISYSLFLHQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTVSPANPIGSDSEVAHQVELAQPVIAFATSSTAHKIPKLRYGTVIIDSPQFLSMINGTSGSGNADIRGDRRVMMSQSDPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMDSQENEPEPVSLFTLPLFHVFGFFMLIRAMSMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALAKSELVNKYDLSSLRLLGCGGAPLGKEVAENFTARFPDVEIVQGYGLTESGGGATRMIGPEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQKGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPDIADAAVVPYPDEEAGQIPMAFVVAPYKKIRRVAFINAIPKNPAGKILRRELVDSALSSGSSKL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1793 531 Pfam AMP-binding enzyme 51 449 IPR000873 -
Prci9g1793 531 Gene3D - 19 444 IPR042099 -
Prci9g1793 531 SUPERFAMILY Acetyl-CoA synthetase-like 53 524 - -
Prci9g1793 531 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 521 - -
Prci9g1793 531 Pfam AMP-binding enzyme C-terminal domain 458 492 IPR025110 -
Prci9g1793 531 CDD 4CL 49 519 - -
Prci9g1793 531 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Prci9g1793 531 Gene3D - 445 510 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1793 Prci-Chr9 29788090 29791540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1793 2 531 Monolignol Biosynthesis Gene Families AT5G63380 61.744 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1793 K01904 - qsa:O6P43_022573 834.328