Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1783 ATGTATCCTCCTCTTCATAGGGTCGTCAAGGATGAGATTGGTGATGATGAAAATTCAGTGTTTGGCCTCAGTCTTCGACTCGCAGCAATGGGTTGCCATGCATATCCTCGCATACCAGCCTCGGAGAACACAGCTTCCACTTGGATCCTTCCTCGTTCTGATGATGATGAAACCAAGAGGGACATAAAAATGATTAAGAGAACCATAGGCATGTCTGATGTGTTTGGAAATTTCACCAGTCATTCGAGCAGTGGAAGTAGTAGCTATCATTATGGCTGGGTTACACATAGCAGCAGTATGAATTTCCTGCCGAGGCTTCATTTCAGGGATCACGTATGGACTTATACTCAGAGGTACCTTGCAGCTGAAGCTGTTGAAGAGGCAGTGAAAGAGATGATCGATTCTGAAGCAAGTCCTGATGAAGCTGAAAAGGATGGATATGCTGACGGAATGAGACTTGTTCAACTTCTAATTGCTTCCGCGGAGGCTGTGGCTTGTCGTGACAAATCACATGCTTCCAACTTACTATCTGAACTTAGAACCAATGCTTTGGTGTTCGGCTCGTCTTTCCAAAGAGTTGCTTCTTGTTTCGTCCAAGGCCTAGCTGATCGTCTAGCCTTGATTCAGCCCATCGGGGCTGTGGGATCTATAGCACCTACAATGAATATTATGGATACAGCTTCTGAAAAAATGGAAGAAGCTTATAAGTTAATGTATGAGATTTGCCCACATATTCAGTTTGGTCACTTCGTGGCTAACTCCACAATATCGGAAGCCTTTGAGGGTCAGAGTTTTCTGCACGTGGTGGACTTGGGGATGAGCCTTGGTCTTCCCCATGGACACCAATGGAGAGGACTGATCCAGGGTCTTGCAAACCGCGCCGGCCAACTCGTTCACCGTCTTCGAATTACCGGCGTCGGCCTTTGTGTTGAGAGACTCCAGGCCATAGGTGAAGAACTCGAGGTTTATGCGAAAAAGTTGGGGATCAATCTGGAATTCTCAGCGGTGCAGAAAAACTTGGAAAATTTGCGTCCTGGTGATATAGAAGTCGTTGAAGGTGAAGTTCTTGTCGTGAACAGCATTCTTCAGCTGCATTGTGTGGTGAAAGAAAGTCGTGGAGCTTTGAACTCAGCGCTTCAGATGATCCATAAGCTCTCACCAAAACTGTTTGTCATGGTTGAGCAGGATTCTAGTCACAACGGGCCCTTCTTTCTAGGGAGATTCATGGAAGCACTGCACTATTACTCTGCAATTTTTGACTCACTTGATGCTGTGTTGCCTAAATATGACACAAAGCGGGCCAAAATAGAACAGTTTTACTTCGCAGAGGAGATAAAGAACATAGTGAGCTGTGAGGGACCAGCGAGGGTAGAGAGGCACGAGAGACTGGACCAGTGGCGCAGGAGGATGAGCCGGGCCGGGTTTCAGGCCGCACCTATCAAGACGGTGGCTCAGGCCAAGCAGTGGCTACAGAAGAAAGGGGTCAGTGATGGTCATTCGGTTGTGGAAGAGAAAGGATGCTTGGTGCTTGGATGGAAATCAAAGCCAATTGTTGCAGCTTCTTGCTGGAAATGCTGA 1578 0.4721 MYPPLHRVVKDEIGDDENSVFGLSLRLAAMGCHAYPRIPASENTASTWILPRSDDDETKRDIKMIKRTIGMSDVFGNFTSHSSSGSSSYHYGWVTHSSSMNFLPRLHFRDHVWTYTQRYLAAEAVEEAVKEMIDSEASPDEAEKDGYADGMRLVQLLIASAEAVACRDKSHASNLLSELRTNALVFGSSFQRVASCFVQGLADRLALIQPIGAVGSIAPTMNIMDTASEKMEEAYKLMYEICPHIQFGHFVANSTISEAFEGQSFLHVVDLGMSLGLPHGHQWRGLIQGLANRAGQLVHRLRITGVGLCVERLQAIGEELEVYAKKLGINLEFSAVQKNLENLRPGDIEVVEGEVLVVNSILQLHCVVKESRGALNSALQMIHKLSPKLFVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAVLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERLDQWRRRMSRAGFQAAPIKTVAQAKQWLQKKGVSDGHSVVEEKGCLVLGWKSKPIVAASCWKC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1783 525 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 519 IPR005202 -
Prci9g1783 525 Pfam GRAS domain family 153 524 IPR005202 -
Prci9g1783 525 ProSiteProfiles GRAS family profile. 144 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1783 Prci-Chr9 29722583 29724310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1783 145 525 GRAS Transcription Factor Family AT1G66350 36.434 3.05e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci9g1783 GRAS 7.6e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1783 - - pop:7463101 715.301