Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1757 ATGGCTCTCCCTTCTGCAAAATCCCACCCGTTTCTCTTCTCATTTTTCTCTCTCCTCTTTATCATCCATGCCAAAATCGATATCCATCCTTTCGATCTCAAAGCTTTCTTAACTTTTCACAAGGACTTGGGCTTCAACGGTCAACACCAGCCATCCGCCACACACCTATGTAGCACTGACGGTGTGTTTTGCGAGAGGAGGCTTTCCGCCAATGAGAGCTATGCTCTCAGGATCACCAGAATTATCTTGAAATCTAAAAAGCTTAATGGAATCTTGTCCCCAACAATTGGACGTTTCTCTGAGCTCAAGGAGCTTTCTCTTTCAAGCAACCAATTGGCAAGTCAAATTCCATCTGAGATTGTTGACTGTCGAAAGCTGGAAATTCTTGACCTCGGAAACAACCGCTTCTCCGGTGAGGTCCCGTCTGAATTATCCTCCCTCATTCGCCTCCGAGTCCTTGACATCTCTTCCAACAAGTTCTCTGGGAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAAGCCTTTCCGTGGCGGACAATCTGTTTACGGGGAGAATTCCAGTGTCCATACGTTCGTTTCGCAATCTCCAACGCTTCAACTTTTCTGGAAATCGTTTTCTTGAAATTCCTGAACCGTTGATGAAGAGATTTGGACATTCGGCATCAAATGTCCCTAAAAGATACATCCTTGCCGAGAATTCTGGTCCAACAACAAGCCACAATGCTACTGCTCCATCCGCCAGCAAGCACCGTAGAAATTCAACTGGTCAAAATGCTCCAGCTCAAGCTCCATCAGCACCACATCATGAACACAAGTCAAAAAAGAGGAAGCTAGGCGGATGGATTCTTGGATTTATAGCAGGAGCATTCGCTGGGAGCATATCTGGGTTTATATTTTCCTTGCTGTTCAAGTTGGCCGTAGCTGTGATCAAAGGAGGAGGGAAGAGCGGCGGACCTGCAATTTTTAGTCCATTGATTAAAAAGGCAGAGGACTTAGCTTTCCTGGAGAAAGAAGACGGGTTGAATTCGTTAGAAATCATTGGAAAAGGTGGTTGTGGAGAAGTTTACAGGGCTGAGTTGCCGGGTAGCAACAAAATCGTTGCTATAAAGAAGGTCATTCAACCTTCAAAGGATGCAGCCGAACTGTCTGAAGAGGACAGTAAGCTTCTGAACAAAAAAATGCGTCAAATTCGATCGGAGATCAACACGGTCGGTCAAATTCGACATCGAAACCTTCTGCCTCTGCTAGCCCATGTGTCAAGGCCCGATTGCCACTACCTTGTATATGAATACATGAAGAACGGAAGCTTACAAGATGTGCTGAATCAAGTTCAAGCAGGTGCAAGAGAGCTAGATTGGTTGGCACGTCACAAAATTGCAGTTGGAGTAGCGGCCGGCCTCGAGTACCTTCACATGCACCATACACCTCGTATAATCCATAGAGATCTCAAGCCCGGAAACATTCTACTTGACGATGACATGGAAGCTCGCATTGCTGATTTTGGTCTTGCAAAAGCGATGCCAGAAGCTCATACCCACGTCTCAACTTCGAACGTGGCCGGAACTGTGGGCTACATAGCACCGGAATATCACCAGACGGTGAAATTCACTGACAAATGCGACATATACAGCTTTGGGGTAGTGCTTGGCATATTGGTGATGGGCAAGATCCCATCTGATGCGTTCTTCCAGGGAACAGAGGAGCTGAGTTTGGTGAAGTGGATGAGGAATGTGATGACTTCTGACAATCCTACGAGGGCAATTGATGAAAAGCTCAGAGGCAACGGATACGAGGAGCAGATGCTTCTGGTTCTGAAGATTGCCTGCTTTTGCACCCTCGATGACCCCAAGGAGAGGCCTAACAGTAAGGATATCAGATGCATGCTGTCCCAAATCAAACACTGA 1908 0.4633 MALPSAKSHPFLFSFFSLLFIIHAKIDIHPFDLKAFLTFHKDLGFNGQHQPSATHLCSTDGVFCERRLSANESYALRITRIILKSKKLNGILSPTIGRFSELKELSLSSNQLASQIPSEIVDCRKLEILDLGNNRFSGEVPSELSSLIRLRVLDISSNKFSGNLNFLKYFPNLESLSVADNLFTGRIPVSIRSFRNLQRFNFSGNRFLEIPEPLMKRFGHSASNVPKRYILAENSGPTTSHNATAPSASKHRRNSTGQNAPAQAPSAPHHEHKSKKRKLGGWILGFIAGAFAGSISGFIFSLLFKLAVAVIKGGGKSGGPAIFSPLIKKAEDLAFLEKEDGLNSLEIIGKGGCGEVYRAELPGSNKIVAIKKVIQPSKDAAELSEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQAGARELDWLARHKIAVGVAAGLEYLHMHHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEAHTHVSTSNVAGTVGYIAPEYHQTVKFTDKCDIYSFGVVLGILVMGKIPSDAFFQGTEELSLVKWMRNVMTSDNPTRAIDEKLRGNGYEEQMLLVLKIACFCTLDDPKERPNSKDIRCMLSQIKH 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1757 635 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 329 432 - -
Prci9g1757 635 Pfam Protein kinase domain 344 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1757 635 ProSiteProfiles Protein kinase domain profile. 342 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1757 635 Gene3D Phosphorylase Kinase; domain 1 341 436 - -
Prci9g1757 635 SUPERFAMILY L domain-like 68 212 - -
Prci9g1757 635 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Prci9g1757 635 Gene3D Transferase(Phosphotransferase) domain 1 437 635 - -
Prci9g1757 635 MobiDBLite consensus disorder prediction 233 274 - -
Prci9g1757 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Prci9g1757 635 FunFam Leucine-rich repeat receptor-like protein kinase 433 635 - -
Prci9g1757 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 75 634 - -
Prci9g1757 635 SMART serkin_6 342 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1757 635 Gene3D Ribonuclease Inhibitor 32 146 IPR032675 -
Prci9g1757 635 SUPERFAMILY Protein kinase-like (PK-like) 336 630 IPR011009 -
Prci9g1757 635 Gene3D Ribonuclease Inhibitor 147 227 IPR032675 -
Prci9g1757 635 MobiDBLite consensus disorder prediction 233 263 - -
Prci9g1757 635 FunFam Leucine-rich repeat receptor protein kinase EMS1 70 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1757 Prci-Chr9 29560170 29562342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1757 1 635 Receptor kinase-like Gene Family AT2G31880 62.730 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Prci9g1757 Pkinase 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1757 - - qsa:O6P43_022621 953.74