Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1727 ATGGCATCAAGCTCTTACTCATCTCCTTGCGCGGCCTGCAAATTCCTGAGAAGAAAGTGCATGCCAGGTTGCATCTTCGCGCCCTACTTCCCTCCCGAGGAGCCTCAAAAATTCGCCCACGTGCACAAAATCTTCGGTGCCAGCAACGTGACCAAGCTGCTCAACGAGCTCCTCCCTCACCAGAGAGAAGACGCCGTCAACTCGCTCGCCTACGAAGCAGAGGCGCGCGTGAGGGACCCAGTGTATGGTTGCGTCGGAGCCATCTCTTTCCTTCAGAGACAGGTCCAGAGGCTGCAGAAGGAGCTCGATGCTGCTAATGCTGATCTTCTTCGCTATGCCTGCAACGAGATCCCTCCTGCTAATTCTCTCTCTGCGGTGCCACCTGGCTTGGGAATAACGCCTTCAACGCTTCAAGTTCAACCGCTGCCCCAGAGGCAAAGGTCGACGGCTATGGAGTATATTAATGGAAGAATCGGCAATACTGAAGGAGGAGCAGGAGGAGGTGGGGGGTTGTACAGGCAATTTCCTGCTGCTTATAATTACTCTCTTCCTTATACTATTCCATGGGCTGATACAGCTTCGGATGCCATCGATGGAGGTGCTGCGGGTGGTGGTGGAGGTAATTTGTAA 630 0.5381 MASSSYSSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFAHVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNEIPPANSLSAVPPGLGITPSTLQVQPLPQRQRSTAMEYINGRIGNTEGGAGGGGGLYRQFPAAYNYSLPYTIPWADTASDAIDGGAAGGGGGNL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1727 209 Coils Coil 88 115 - -
Prci9g1727 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 136 - -
Prci9g1727 209 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Prci9g1727 209 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1727 Prci-Chr9 29330554 29332941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1727 2 146 AS2 family AT5G63090 76.552 2.37e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci9g1727 LOB 9.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1727 - - pcin:129320934 382.104