Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1719 ATGCCTGTAAATCCATGGACCCTCCTCTGCCTCTGCTTTTCTCTTTCACTTCATCATTCTTTTCTAGCTTTTGCAGTAAACTCGCAAGGAGAAGCTCTTCTTTCATGGAAGAGAACCCTCAAGGGATCCCTGGAGGTGTTGAGCAATTGGAATCCAAATGACAGTGCACCATGTGGCTGGTCTGGAGTTAGCTGCAACTCCAACAACGAGGTTGTGGAATTAGATCTGAGGTATGTGGATTTGGTCGGAACACTTCCTTCTAATTTCAGCTCGTTGCTTTCCCTGAACAAGCTAGTCCTAACGGGAGCGAACCTCACTGGTACGATTCCGAAAGAAATAGGCACTCTTGGCCTGCTCGACCTCTTGGACTTAAGCGGCAATGCCTTGACTGGTGAAATTCCAAGTGAACTTTGCTTCTTGTCAAAGCTTGAGCAGCTCCATCTGAACTCAAACCAGCTCGTAGGTTCGATTCCGAGTGCAATCGGGAATCTCACAGAGTTGGCGTTGCTGGTTTTATATGACAATCAACTAGGTGGTGAAATTCCCAGGACCATTGGTAACTTGAGGAACCTGCAAGTGATCAGAGCTGGAGGAAACAAGAACCTTCAAGGCCCCTTGCCACACGAAATTGGCAACTGTACCGACTTGGTCATTTTGGGTTTGGCTGAAACTAGTATCTCAGGTTTTCTTCCTCCAACTCTGGGCCTTCTTAAGAAGCTTGACACTCTTGCAATTTACACTTCACTTCTCTCTGGCCAAATTCCTCCCGAACTTGGGGACTGCAATGAGCTTCAGAACATTTATCTGTACGAGAATTCCCTATCAGGGTCTATACCAAGTAGGCTGGGAAACCTTGGAAACCTCAAAAATCTTCTACTATGGCAGAACAATCTAGTTGGCATCATCCCGCCGGAGATTGGAAATTGCGACCAACTATCCGTCATTGACATTTCGATGAACTCACTTGTCGGAAGCATTCCCAAAAGTTTTGGAAATTTGACGTTGCTAGAGGAACTTCAACTCAGCGTCAATCAGATTTCGGGTGAGATTCCAACAGAATTAGGAAACTGCCAGCTACTCACTCACGTTGAGCTGGACAACAACCTAATCACGGGTACAATACCTTCTGAATTTGGGAACCTTGGGAATCTAACTCTACTATTGTGGCACAACAAGCTCGAAGGAACTATACCATCTTCGCTGTCGCGTTGTCAAAATCTGGAAGCAATTGATCTGTCACAGAATGGATTGACGGGTTCCATACCGAAGGGGATATTCCTGCTCAAGAATCTGAATAAGCTTTTACTACTCTCGAACAATCTCTCCGGGAATATACCCCCTGAGATTGGGAACTGTACGTCTCTGATTCGGTTCCGAGCGAGCAACAATAAAATCACAGGGAACATTCCACCAAATATAGGAAATCTTAAGAACTTGATTTTCTTTGATCTTGCAAGCAATCGCATTTCAGGATTCATTCCAGAAGAGCTCTCAGGCAGTCGGAATCTAGCGTTTCTGGACATTCATTCCAACTTAATATCAGGAAGCTTGCCGGAAAGTCTCAGCCAGCTAGTCTCACTTCAATTTATTGATGTCTCCGATAACCTAATTGAAGGTAAACTAAACCCGAGCCTGGGCTCCCTTGGCGCACTCACCAAGATCGTTCTCAGAAAAAATCATATATCCGGATCAATCCCGAATGAATTTGGTTCTTGTACAAAGCTGCAACTATTGGACCTTAGTAGCAATGAACTCTCTGGCAAAATCCCAGGCAGTCTGGGGAGCATTCCGGCACTAGAAATCGCGCTGAACCTGAGCTGGAATAAGCTCTCTGGTGAGATCCCTAGGGAGTTCTCGGCATTGAGCACTGGAATTCTGGACTTATCGCACAACAAGCTCACCGGTAGCGTTCAGTATCTCGAGGACCTTCAAAATCTCGTGGTCCTCAACATCTCATACAACAATCTCTCCGGTAGCGTGCCAGACAAGCCTTTCTTCTCAAAGCTCCCTCTCAGCGTCCTCGAGGGAAACCCGTCGCTCTGCTTCCCCGGCAACCGATGCCCAGGAAATATTTTCAAACGACCAATTCGGCGGACAAAGGCGGCGCGTATAGCCATGGTGGTCCTTCTGTGTACGGCGTGTGCACTTTTCCTTTCGGCCTTATACGTCGTCGTCGCAGCAAGAAGACGGGGGTTCCCGGAGGACGGTCTGGACCTCAACGGTAGAGATAGCGACGTGGAGATGGGCCCCCCTTGGGTGACACTCTATCAGAAGCTAGACTTGTCAATCTATGACGTGGCAAAATGCCTAACAGTTGGCAACGTGATTGGGCGCGGACGATCCGGCGTCGTTTATAGAGTGGATCTCCCGTCGGGATTAACGATCGCCGTGAAAAGGTACAGATTATCGGAGAAATTCTCGGCCTCTGCATTCTCCTCGGAGATTGCCACCCTAGCAAGAATCCGGCACCGGAATATCGTACGGCTATTGGGTTGGGCGGCGAACCGGAAAACGAAACTACTGCTGTACGATTATTTACCGAATGGTAATTTGGATACCCTCTTGCACGAGGGGTGCACCGGGTTAATCGAGTGGGAGACTCGGTTCAAGATAGCATTGGGCGTGGCTGAAGGCTTGGCTTACCTGCACCACGACTGCGTGCCGGCGATCTTGCACCGGGACGTGAAGGCGCATAACATTTTGTTGGCAGACACATGCGAACCTTGTTTGGCAGATTTCGGATTTGCTAGATTGGTTGACGACGATCAAAGTCCTTTTTCTGTTAATCCACAGTTCGCGGGTTCTTACGGCTATATTGCGCCAGAATATGGATGCATGGTGAGGATCACAGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTACTGTTGGAAATAATAACGGGGAAAAGGCCCGTGGACGCATCATTCGGGGAGGAGGATCAGCACGTGATAGGGTGGGTGAGACAGAAGCTGAAGATCAGCAAGACGGACCCAGCGGCGATTTTGGATTCTAAGCTTCAAGGCCTTCCAGACACTCAAATCCAAGAGATGCTTCAAGCCCTCGGGATCGCTCTCTTGTGCACCAGTCAGCGTCCCGACGATCGCCCCGCCATGAAGGATGTTGCCGCATTATTGAGAGAGATTAAACACGATCCTTCCCTCTCTGATCAGGCCCACAAGCCTGTCGATTCCATTCCCCCGAAAACGACGCCTCAGCCCTCGTCGTATTCCTCGTCCTCCGCCTTGTCCCTGCTTCAATCCTCTTCCCTTTCATCCACCTTGCCCGCTGCTTATTCTTCTTCCACTCTCGCCGTTTATCACCCACCTGCCGCCAATAATTAA 3342 0.4889 MPVNPWTLLCLCFSLSLHHSFLAFAVNSQGEALLSWKRTLKGSLEVLSNWNPNDSAPCGWSGVSCNSNNEVVELDLRYVDLVGTLPSNFSSLLSLNKLVLTGANLTGTIPKEIGTLGLLDLLDLSGNALTGEIPSELCFLSKLEQLHLNSNQLVGSIPSAIGNLTELALLVLYDNQLGGEIPRTIGNLRNLQVIRAGGNKNLQGPLPHEIGNCTDLVILGLAETSISGFLPPTLGLLKKLDTLAIYTSLLSGQIPPELGDCNELQNIYLYENSLSGSIPSRLGNLGNLKNLLLWQNNLVGIIPPEIGNCDQLSVIDISMNSLVGSIPKSFGNLTLLEELQLSVNQISGEIPTELGNCQLLTHVELDNNLITGTIPSEFGNLGNLTLLFXWHNKLEGTIPSSLSRCQNLEAIDLSQNGLTGSIPKGIFLLKNLNKLLLLSNNLSGNIPPEIGNCTSLIRFRASNNKITGNIPPNIGNLKNLIFFDLASNRISGFIPEELSGSRNLAFLDIHSNLISGSLPESLSQLVSLQFIDVSDNLIEGKLNPSLGSLGALTKIVLRKNHISGSIPNEFGSCTKLQLLDLSSNELSGKIPGSLGSIPALEIALNLSWNKLSGEIPREFSALSKXGILDLSHNKLTGSVQYLEDLQNLVVLNISYNNLSGSVPDKPFFSKLPLSVLEGNPSLCFPGNRCPGNIFKRPIRRTKAARIAMVVLLCTACALFLSALYVVVAARRRGFPEDGLDLNGRDSDVEMGPPWEXTLYQKLDLSIYDVAKCLTVGNVIGRGRSGVVYRVDLPSGLTIAVKRYRLSEKFSASAFSSEIATLARIRHRNIVRLLGWAANRKTKLLLYDYLPNGNLDTLLHEGCTGLIEWETRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLADTCEPCLADFGFARLVDDDQSPFSVNPQFAGSYGYIAPEYGCMVRITEKSDVYSFGVVLLEIITGKRPVDASFGEEDQHVIGWVRQKLKISKTDPAAILDSKLQGLPDTQIQEMLQALGIALLCTSQRPDDRPAMKDVAALLREIKHDPSLSDQAHKPVDSIPPKTTPQPSSYSSSSALSLLQSSSLSSTLPAAYSSSTLAVYHPPAANN 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1719 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 26 199 - -
Prci9g1719 1116 Gene3D Transferase(Phosphotransferase) domain 1 849 1067 - -
Prci9g1719 1116 ProSitePatterns Protein kinases ATP-binding region signature. 779 801 IPR017441 GO:0005524
Prci9g1719 1116 Gene3D Ribonuclease Inhibitor 282 361 IPR032675 -
Prci9g1719 1116 SMART LRR_typ_2 645 678 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 549 573 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 429 453 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 140 164 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 333 357 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 381 405 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 285 309 IPR003591 -
Prci9g1719 1116 SMART LRR_typ_2 477 501 IPR003591 -
Prci9g1719 1116 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 462 1049 - -
Prci9g1719 1116 Gene3D Ribonuclease Inhibitor 25 174 IPR032675 -
Prci9g1719 1116 SUPERFAMILY Protein kinase-like (PK-like) 758 1049 IPR011009 -
Prci9g1719 1116 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 424 518 - -
Prci9g1719 1116 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Prci9g1719 1116 Pfam Leucine rich repeat 552 611 IPR001611 GO:0005515
Prci9g1719 1116 Gene3D Phosphorylase Kinase; domain 1 764 848 - -
Prci9g1719 1116 ProSiteProfiles Protein kinase domain profile. 773 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1719 1116 Pfam Protein kinase domain 775 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1719 1116 Gene3D Ribonuclease Inhibitor 601 690 IPR032675 -
Prci9g1719 1116 Gene3D Ribonuclease Inhibitor 362 600 IPR032675 -
Prci9g1719 1116 SUPERFAMILY RNI-like 315 661 - -
Prci9g1719 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 423 - -
Prci9g1719 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Prci9g1719 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 849 1065 - -
Prci9g1719 1116 SUPERFAMILY RNI-like 73 395 - -
Prci9g1719 1116 FunFam Leucine-rich repeat receptor protein kinase EMS1 519 603 - -
Prci9g1719 1116 FunFam Putative LRR receptor-like serine/threonine-protein kinase 604 688 - -
Prci9g1719 1116 Gene3D Ribonuclease Inhibitor 175 281 IPR032675 -
Prci9g1719 1116 MobiDBLite consensus disorder prediction 1053 1084 - -
Prci9g1719 1116 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Prci9g1719 1116 SMART serkin_6 773 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1719 Prci-Chr9 29250575 29255820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1719 24 1081 Receptor kinase-like Gene Family AT5G56040 53.796 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci9g1719 Pkinase 5.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1719 - - gmx:100778064 1573.14