Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1718 ATGGATATCAACATAGGAGGACACGTAGAGAAGGTGAATGGAAGAGAATTGACTTATCGGGAATTTGTGAACCGATACATGGAGAAGAACCAGCCCGTGGTGCTCACAGGACTAATGGACGATTGGAGGGCTTGCAGAGACTGGGTCACCGATAATGGCCAACCCAACCTTAAGTTTTTTTCTTCCTCTTTTGGGAGTTCTAAAGTTCAGGTTGCAGATTGTGGCACTAGAGAATTCACGGATCAGAAAAGGGAGGAGATGCGTGTTTCAGATTTTATCATGCGTTGGCTAGAGCGTTATCCAGTACAGCCTAATACTGAAAATCAGACTAGCAATGATCATTGCTCTGTGCTGTATTTGAAGGACTGGCACTTTGTAAAGGAGTATCCGGAGTATTTAGCATACATCTCTCCACTGTTCTTTCATGATGATTGGCTCAACCTCTACCTCGACTACTACAAAATGCATACAGATCCTGACAGTTATCAACAAAATAATGAAATATGTTGCTCTGACTATCGATTTGTTTACATGGGGGTAAAAGCAGGATCTTGGACTCCTCTTCATGCCGACGTTTTCAGATCATATAGTTGGTCAGCAAATGTCTGCGGGAAGAAGAGATGGCTTTTTCTAGCTCCTCCTCAGAGTCATCTTGTATTTGATAGGAATGTGAAAAGTTGCGTGTATGATATCTTTGCTGAAGTAAGTGAATCAACGTTTCCTGGCTTTGGAAAGACTATCTGGTTAGAATGCGTGCAAGAAGCAGGTGAAATTATTTTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATCTGGAGGATACTATATCTATAAACCACAACTGGTTCAATGCGTATAACCTTTCTTGGGTGTGGAACTTGCTTTTGAGCGACTACAATGAGGCCAAGGAATACATTGAGGACATCAGGGATATATGTGATGATTTTGAGGGTCTCTGCCAGCGCAATCTTTTTGCTAACACAGGGATGAACTTTTATGACTTCTTTACTTTCATAACATGCTTTACCCTGGCCAACTTGGCATTGCTTTGCTATCTAAGTGGAAAATATGGAAACACCCCTGAAAGCTCACTGACAATGACTCAACATTTAGTTTTAAATCTTGGGTCAGTAAGGAAGGTTGCATTAGAGATGAAAAGCAAGCATGCTCTGGATGGAAATCATGACTGCTTCCTGGACATTATGAAAATATCTGAAGACCCTAGGTTTTCTAAATTGTGTGCGCATTTGAGAAGAATATTTGTGACGATACATGAGCAGCCATATTTGTCTTCTGAGTTTGACAAATCTGCAGTTGATTATCTGATGGGCCTTAATGTTTTGCAAACATGCTCTTCTTCTCGGATCTACGCACCTGAAGATCTCATTGAACTTATAGACAATGCTGTTGGGGAACTCGGTGACAATTACACTCGGGAGCTGTCTGCTATACATGCTGGTTGA 1464 0.4146 MDINIGGHVEKVNGRELTYREFVNRYMEKNQPVVLTGLMDDWRACRDWVTDNGQPNLKFFSSSFGSSKVQVADCGTREFTDQKREEMRVSDFIMRWLERYPVQPNTENQTSNDHCSVLYLKDWHFVKEYPEYLAYISPLFFHDDWLNLYLDYYKMHTDPDSYQQNNEICCSDYRFVYMGVKAGSWTPLHADVFRSYSWSANVCGKKRWLFLAPPQSHLVFDRNVKSCVYDIFAEVSESTFPGFGKTIWLECVQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLSDYNEAKEYIEDIRDICDDFEGLCQRNLFANTGMNFYDFFTFITCFTLANLALLCYLSGKYGNTPESSLTMTQHLVLNLGSVRKVALEMKSKHALDGNHDCFLDIMKISEDPRFSKLCAHLRRIFVTIHEQPYLSSEFDKSAVDYLMGLNVLQTCSSSRIYAPEDLIELIDNAVGELGDNYTRELSAIHAG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1718 487 Gene3D Cupin 2 284 - -
Prci9g1718 487 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 11 336 - -
Prci9g1718 487 SMART cupin_9 118 299 IPR003347 -
Prci9g1718 487 SUPERFAMILY Clavaminate synthase-like 7 311 - -
Prci9g1718 487 ProSiteProfiles JmjC domain profile. 126 299 IPR003347 -
Prci9g1718 487 Pfam Cupin-like domain 21 282 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1718 Prci-Chr9 29243723 29248782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1718 7 291 Glycosyltransferase AT1G78280 26.780 2.33e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci9g1718 Cupin_8 3.8e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1718 - - gsj:114409851 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1718 9 29243723 29248782 Prci9g1718 9 29243723 29248782 ECH