Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1689 ATGGATCTTCACACAAATCTCAGAGATCACTCTTACACCTCACAGCCAATGCATCTTCAAGAAACCTACCTGAAGCCTAATATGAAATTAGATGATGAATCTCCTTTTGGGGTTCCTAATTCATCATCACAGGGTTTCTTGCAAGATTTTAATTACCATGTTGATCATCATCATAACCAGGTTCACCTTAATGGGTCTTCTTCATCCAACCCAGCTTTTGGGATTCATACTTGGAGTTTTGATTCTTTTGACAATTTTGATGTTTACGAGTGCAAGCCTTTTGTTGAGATCAATAAGGGGCAAGCTCTGATTTTGGATAATACGCAATATGGAGCTAATTGTAGCTTGAACGTCCCTCAGAGAAGTCATCAAGTCAATAAGAACCAAACCTATGTGCCTTCTTTCAATTCTCAGGAAATTACAAAGCCTGTGAATTTTGTTGTGCCAGATGAACTCTCATGCATATACCCTTCCATGAATTATTACAGAAAAGTTGGCTTCATCAATAAGAAAAGTAATAGGGTATCATCGTCTCTAACCAGTACTAGAAGGATGAGTAACAGGCTTCGCAAGAAATCCAACTCTGTAAAGGGCCAATGGACCATAGAAGAAGATAGGTTGTTGATTCAATTGGTAGAACAATATGGAGTGAGAAAGTGGTCTCATATTGCTCAGATGTTGCCAGGAAGAATAGGCAAACAGTGCAGAGAGAGATGGCATAATCATCTAAGACCTGACATAAAGAAGGAGACATGGACAGAAGAAGAAGACAAAATACTGATAGAAGCGCATGGAGAGATTGGAAACAAATGGGCAGAGATAGCCAAGAGATTGCCAGGAAGAACAGAAAACTCCATAAAGAACCATTGGAACGCGACAAAGAGAAGACAATTCTCAAAGAGAAAATGTCGCTCAAAGAACCCAAGAACCTCTCTTCTGCAAGAATATATCAAAAGCTTGAACTTAGACCAAAACCCACCATTAGACTATCGCAAAGGATCATCATCATCATCATCTTCTGCTGCTACTAACACTGCTGCAACCATAAGAGAACCTGATGAAGCATCTCACTCTCAGTTAATACGTACTGCTTCCAATGAGGATCGATTGGTGGCGAATTGCGGGTTTAAGGAGGCCGAAGAGTTTTGCTTTGACGAGAGCTTTCTCGGAGAAGGTGGGTGCAGCAACATTGAATGTGTGCTAGACGACGACGACGATATGGGTCGTGAGAAGTTTGAAGAAGATCAGAAGGAGGAGCTGGATTTAGTGGAGATGATGTCTCGGGTCAATCAAACTATTATTGATATGTAA 1311 0.4066 MDLHTNLRDHSYTSQPMHLQETYLKPNMKLDDESPFGVPNSSSQGFLQDFNYHVDHHHNQVHLNGSSSSNPAFGIHTWSFDSFDNFDVYECKPFVEINKGQALILDNTQYGANCSLNVPQRSHQVNKNQTYVPSFNSQEITKPVNFVVPDELSCIYPSMNYYRKVGFINKKSNRVSSSLTSTRRMSNRLRKKSNSVKGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKETWTEEEDKILIEAHGEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQFSKRKCRSKNPRTSLLQEYIKSLNLDQNPPLDYRKGSSSSSSSAATNTAATIREPDEASHSQLIRTASNEDRLVANCGFKEAEEFCFDESFLGEGGCSNIECVLDDDDDMGREKFEEDQKEELDLVEMMSRVNQTIIDM 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1689 436 SUPERFAMILY Homeodomain-like 195 290 IPR009057 -
Prci9g1689 436 Gene3D - 196 248 - -
Prci9g1689 436 CDD SANT 251 294 IPR001005 -
Prci9g1689 436 Pfam Myb-like DNA-binding domain 249 291 IPR001005 -
Prci9g1689 436 Pfam Myb-like DNA-binding domain 197 243 IPR001005 -
Prci9g1689 436 SMART sant 196 245 IPR001005 -
Prci9g1689 436 SMART sant 248 296 IPR001005 -
Prci9g1689 436 MobiDBLite consensus disorder prediction 328 359 - -
Prci9g1689 436 CDD SANT 200 243 IPR001005 -
Prci9g1689 436 ProSiteProfiles Myb-like domain profile. 192 243 IPR001005 -
Prci9g1689 436 PANTHER MYB PROTEIN-RELATED 174 344 - -
Prci9g1689 436 FunFam Transcriptional activator Myb isoform A 196 249 - -
Prci9g1689 436 ProSiteProfiles Myb-like domain profile. 244 294 IPR001005 -
Prci9g1689 436 MobiDBLite consensus disorder prediction 324 359 - -
Prci9g1689 436 Gene3D - 250 317 - -
Prci9g1689 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 248 298 IPR017930 -
Prci9g1689 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 192 247 IPR017930 -
Prci9g1689 436 FunFam Transcription factor MYB119 250 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1689 Prci-Chr9 29096250 29098007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1689 139 403 MYB Transcription Factor Family AT4G18770 57.407 9.61e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1689 Myb_DNA-binding 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1689 K09422 - gmx:100816653 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1689 9 29096250 29098007 Prci9g1689 9 29096250 29098007 ECH