Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1683 ATGGGTTTTTCTTCTCCGCACATCTGCATGGAATCATCAGATTACTGGCTTCAGGGCACAATTCACGAGGAATCTGGATTGGAATCATCTTCACCATCAGGAGACATGCTTACATGCTCCAGGCCCTTGATAGAGAGGAGGCTACGACCACCACAAGACCAAGCCCTCAAGTGCCCTAGGTGTGATTCCACACACACTAAGTTCTGCTACTACAACAATTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACCAAAGGTGGCACTCTCAGAAACATCCCCGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCAAGCAAGAAATCCAATAATGACCCACCACAGCATAATCAAAACCAGCCAGTGCCTTCTGCAAGAATAGCCACATCTTATCACCGCCATGACAACCCTAAAGACCGTCTTCAACTTTCTTTTCCAGACGTGCAGTTTTCTCACAGCGGTAACTTACTAGGAAACCCTAATTTCATGCTTGAGAACCCTAGGCCTATTGACTTCATGGAAAGCAAGCTGGAAGGGATAATTGGGAGTACACCTGAGAACTTCCATTTTCTGGGGAATACTGATATGGGTATGGGAATTAGAGTTGGTGACATTAATGGTCATCACAATGGGTTACCGCCAAATTTTCAGAGTCTTTGCTCTCCATCGGGATTTGGGGGTATTTCACCTTTTGATGGTAATAACAATAACAGTACTGGGACTTATAATATCATGGACTCTTCGTGCCAGAGACTGATGCTGTCATATGATCATCCCAATGAGGACCCAAATGCCATAATTGATGTGAAGCCAAACCCTAAGCTTTTGTCTCTTGAATGGCAGGACCAGGGTTGCTCTGATGCTGAAAAAGGGTCATTTGCGTATCTTAACAGTCTAGGATCATGGATCGGCATGATTAATGGCTATGGTTCGTCCACGACAAACCCTCTAGTCTAG 978 0.453 MGFSSPHICMESSDYWLQGTIHEESGLESSSPSGDMLTCSRPLIERRLRPPQDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNNDPPQHNQNQPVPSARIATSYHRHDNPKDRLQLSFPDVQFSHSGNLLGNPNFMLENPRPIDFMESKLEGIIGSTPENFHFLGNTDMGMGIRVGDINGHHNGLPPNFQSLCSPSGFGGISPFDGNNNNSTGTYNIMDSSCQRLMLSYDHPNEDPNAIIDVKPNPKLLSLEWQDQGCSDAEKGSFAYLNSLGSWIGMINGYGSSTTNPLV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1683 325 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 45 199 IPR045174 GO:0003700|GO:0006355
Prci9g1683 325 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Prci9g1683 325 MobiDBLite consensus disorder prediction 101 130 - -
Prci9g1683 325 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Prci9g1683 325 MobiDBLite consensus disorder prediction 115 130 - -
Prci9g1683 325 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1683 Prci-Chr9 29053831 29055891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1683 1 325 C2C2-Dof Transcription Factor Family AT5G62940 40.360 3.34e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci9g1683 zf-Dof 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1683 - - gmx:100806697 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2862 4 40609100 40610698 Prci9g1683 9 29053831 29055891 CCT