Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1667 ATGGAAGGTAGGCATGAATATAAGAAGGGGCTGTGGAATTCCCAGGAAGACAAGATTTTAATGGAGCACGTGAAGCAGCACGGGGTAGGGAAGTGGAATCGTATTGCTAAAGCCACTGGGTTGAAGAGATGTGGCAAAAGTTGCAGACTGAGGTGGATGAACTATCTGAGTCCGAACGTGAAGCGTGGAGATTTCTCCGAAGAAGAAGACGACCTCATCATTCGCCTCCACAATCTCCTAGGAAATAGATGGTCATTGATAGCAGGGAGGGTGCCAGGAAGGACAGACAACCAAGTGAAGAACTACTGGAACACTCATTTGAGCAAAAAGTTGGGTGTTAATAAGAAGGAAAAGATCAAAACTTGTCAACATTCAAAGTCACCTCTACCAAATCAAATGATATGGCTCTTAACATCAAGTCAAATCCTTACAAGGAAATTTTAA 444 0.4324 MEGRHEYKKGLWNSQEDKILMEHVKQHGVGKWNRIAKATGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSKKLGVNKKEKIKTCQHSKSPLPNQMIWLLTSSQILTRKF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1667 147 FunFam Transcription factor WER 63 132 - -
Prci9g1667 147 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 117 - -
Prci9g1667 147 SMART sant 8 58 IPR001005 -
Prci9g1667 147 SMART sant 61 109 IPR001005 -
Prci9g1667 147 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Prci9g1667 147 Gene3D - 8 61 - -
Prci9g1667 147 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Prci9g1667 147 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Prci9g1667 147 FunFam MYB-related transcription factor 8 61 - -
Prci9g1667 147 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Prci9g1667 147 Gene3D - 64 130 - -
Prci9g1667 147 CDD SANT 12 56 IPR001005 -
Prci9g1667 147 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Prci9g1667 147 CDD SANT 65 107 IPR001005 -
Prci9g1667 147 SUPERFAMILY Homeodomain-like 7 103 IPR009057 -
Prci9g1667 147 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1667 Prci-Chr9 28913643 28914723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1667 5 141 MYB Transcription Factor Family AT5G40330 70.290 8.42e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1667 Myb_DNA-binding 6.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1667 K09422 - zju:107418407 224.942