Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1648 ATGCCTTCCTCTCCCTCAGCAGCTCATGCCAATCATACCCTTTCTCTCATGGTTCTTGTGCAGTATATTCCTCGATTCTTTCAGATTTTCCCTCTTCAACGCCGGATTATAAAAACTAGTGGCCTTATAGCCAAGACGGCTTTGGCAGGGTCTTTATACAATCTTGGCTTTTACGTGTTGGCCAGCCATGTTTTAGGGGCTGCATATTATTTGTTAGCGATTCATCGTCAGTCTCAATGCTGGAGAGAAACTTGTGCGAAGGAAGCCAACGCAACACACTCTCCATCTTGTTCGCCTCAATTTCTTGATTGCGAGTCACTGAGCGATCCTGCACGGGACGCTTGGTACCAACAAACATTCCTTACTGTCGTCTGTGACGCTAAGAATGAAGACAGCCACTTCGAGTTCGGAATTTATGCCGACGCTTTTACTGACGAAGTTGCTACATCCAGGTTCATCGAAAGATACTTTTATTGCCTCTGGTGGGGCTTGAAGAGTCTATGTGCATATGGACAAAATCTTAATACAAGCGTCTTCGTTTCTGAATCTTTATTTGCGAGTTTCATCTGCATTGCAGGTCTAATTCTCTTTGCGCTTCTCATTGGTAACATGCAGAATTATTGGCAATCTACTACAGCAAGACTTGAAGAATGGAGAATTAAACAAAGAGATACGGAAGAGTGGATGAGGCATCGTCAACTTCCACCAGAACTGCAAGAACGTGTGCGTCGGTTTGTCCAATACAAATGGCTAGCTACTAGAGGTGTAGATGAAGAAATTATTTTGCGTTCTTTACCTTTGGACCTTCGGCGTCAGATTCAGAGACATATTTGTCTTGCTCTTGTTCGTCGGGTTCCATTTTTTGGTCAAATGGATGATCAGCTGCTAGATGCAATATGTGAACGCCTTGTGTCCTCCCTGAATACAAAAGACACGTATATAGTAAGGGAAGGAGACCCAGTGAAAGAGATGATTTTCATCATTAGAGGACAAGTGGAGAGCTCCACCACAGATGGTGGGAGAACTGGATTCTTCAATTCTATAACCCTTAGACCAGGTGACTTCTGTGGCGAAGAACTGCTGACTTGGGCTTTGGCCACCACATCTAGCAGCCTTCCATCGTCCACTCGAACCGTAAGGACACTCACTGAATTGGAAGCATTTGCACTCAGAGCCGAAGACATCAGATTCTTTGGCATCCAGTTCAAGAGGCTGCATAGCAAGAAAATTCAGCATGCTTTCAGGTACTACTCCCACCAATGGAGGGCTTGGGGGGCTTGCTTTATACAAGCTGCATGGAGGCGCCATGTGAAGAAGAAGTTGGCAATGGAGCTTTTGGAGAAGGAGAATCTGTTAGGGTTAACAGAATTGGATGGTGAAGAATCTCCTTCTTGGGGAGAGAGCTCAACAGGGAAGGTTGCTGGTGGAAGCCTCGCGACTACACTTTTGGCTTCGAAATTTGCTAAAAACACCAGAAGAGGGGCACATCATCAGAAAGTGACAATCCCTGACGAAAGCAGCTTGAAGATGCCGAAGCTGTTTAAGCCTTCAGACCCTGACTTCTTAGTAGACCACGAAGATTAG 1584 0.4539 MPSSPSAAHANHTLSLMVLVQYIPRFFQIFPLQRRIIKTSGLIAKTALAGSLYNLGFYVLASHVLGAAYYLLAIHRQSQCWRETCAKEANATHSPSCSPQFLDCESLSDPARDAWYQQTFLTVVCDAKNEDSHFEFGIYADAFTDEVATSRFIERYFYCLWWGLKSLCAYGQNLNTSVFVSESLFASFICIAGLILFALLIGNMQNYWQSTTARLEEWRIKQRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEEIILRSLPLDLRRQIQRHICLALVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVKEMIFIIRGQVESSTTDGGRTGFFNSITLRPGDFCGEELLTWALATTSSSLPSSTRTVRTLTELEAFALRAEDIRFFGIQFKRLHSKKIQHAFRYYSHQWRAWGACFIQAAWRRHVKKKLAMELLEKENLLGLTELDGEESPSWGESSTGKVAGGSLATTLLASKFAKNTRRGAHHQKVTIPDESSLKMPKLFKPSDPDFLVDHED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1648 527 SMART cnmp_10 287 417 IPR000595 -
Prci9g1648 527 SUPERFAMILY cAMP-binding domain-like 216 407 IPR018490 -
Prci9g1648 527 Gene3D Helix hairpin bin 213 278 - -
Prci9g1648 527 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 520 - -
Prci9g1648 527 Gene3D - 4 210 - -
Prci9g1648 527 FunFam Cyclic nucleotide-gated ion channel 1 285 402 - -
Prci9g1648 527 Pfam Ion transport protein 19 214 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci9g1648 527 MobiDBLite consensus disorder prediction 489 527 - -
Prci9g1648 527 FunFam Cyclic nucleotide-gated ion channel 1 214 278 - -
Prci9g1648 527 SUPERFAMILY Voltage-gated potassium channels 22 250 - -
Prci9g1648 527 CDD CAP_ED 287 417 IPR000595 -
Prci9g1648 527 ProSiteProfiles cAMP/cGMP binding motif profile. 287 361 IPR000595 -
Prci9g1648 527 Gene3D Jelly Rolls 285 404 IPR014710 -
Prci9g1648 527 Pfam Cyclic nucleotide-binding domain 310 396 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1648 Prci-Chr9 28825913 28828518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1648 7 522 Ion Channels AT3G48010 65.913 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1648 K05391 - gmx:100783672 758.444