Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1647 ATGATGATGAATAGATACGCAGCTTCTTCTTCGACTCGATTGTTACGAAGCCATTTCTCTAAATCTTTCTCCCTCAGAAAGAAGGTTCCCTGGTGGTACCAAATCCTCGATCCCAAATCCGAGTTCGTCGACCGATGGAATCGCACCTTCCTCTACGCCAGCTTCCTCGCGCTCTTCCTCGACCCTCTCTATTTCTATTTCCCCATTATCGGCAAAGAGAATTGCATGAAAATCGACTTGCCCCTCGGCGTCTTCGTCACTTTCTTCCGCACCCTCAACGATATCTTCTTCGTCTTCCACATCGTTCTCAAGTTCCGTACGGCCTACTTCTCTTCCCACTCTTTTGGCCGCGGCGATCTCATTACTGACCCCTACCTCATCGCCATTCGCTATCTCAAGACCGATTTCAGCTTTGATTTCCTCGCATGCCTTCCTCTCCCTCAGATCGTGATTTGGTTCATCATTCCCGCGTTCAAACATACAACAGCAGCTCATGCCAATCATACCCTTTCTCTCATGGTTCTTGTGCAGTATATTCCTCGATTCTTTCAGATTTTCCCTCTTCAACGCCGGATTATAAAAACTAGTGGCCTTATAGCCAAGACGGCTTTGGCAGGGTCTTTATACAATCTTGGCTTTTACGTGTTGGCCAGCCATGTTTTAGGGGCTGCATATTATTTGTTAGCGATTCATCGTCAGTCTCAATGCTGGAGAGAAACTTGTGCGAAGGAAGCCAACGCAACACACTCTCCATCTTGTTCGCCTCAATTTCTTGATTGCGAGTCACTGAGCGATCCTGCACGGGACGCTTGGTACCAACAAACATTCCTTACTGTCGTCTGTGACGCTAAGAATGAAGACAGCCACTTCGAGTTCGGAATTTATGCCGACGCTTTTACTGACGAAGTTGCTACATCCAGGTTCATCGAAAGATACTTTTATTGCCTCTGGTGGGGCTTGAAGAGTCTATGTGCATATGGACAAAATCTTAATACAAGCGTCTTCGTTTCTGAATCTTTATTTGCGAGTTTCATCTGCATTGCAGGTCTAATTCTCTTTGCGCTTCTCATTGGTAACATGCAGAATTATTGGCAATCTACTACAGCAAGACTTGAAGAATGGAGAATTAAACAAAGAGATACGGAAGAGTGGATGAGGCATCGTCAACTTCCACCAGAACTGCAAGAACGTGTGCGTCGGTTTGTCCAATACAAATGGCTAGCTACTAGAGGTGTAGATGAAGAAATTATTTTGCGTTCTTTACCTTTGGACCTTCGGCGTCAGATTCAGAGACATATTTGTCTTGCTCTTGTTCGTCGGGTTCCATTTTTTGGTCAAATGGATGATCAGCTGCTAGATGCAATATGTGAACGCCTTGTGTCCTCCCTGAATACAAAAGACACGTATATAGTAAGGGAAGGAGACCCAGTGAAAGAGATGATTTTCATCATTAGAGGACAAGTGGAGAGCTCCACCACAGATGGTGGGAGAACTGGATTCTTCAATTCTATAACCCTTAGACCAGGTGACTTCTGTGGCGAAGAACTGCTGACTTGGGCTTTGGCCACCACATCTAGCAGCCTTCCATCGTCCACTCGAACCGTAAGGACACTCACTGAATTGGAAGCATTTGCACTCAGAGCCGAAGACATCAGATTCTTTGGCATCCAGTTCAAGAGGCTGCATAGCAAGAAAATTCAGCATGCTTTCAGGTACTACTCCCACCAATGGAGGGCTTGGGGGGCTTGCTTTATACAAGCTGCATGGAGGCGCCATGTGAAGAAGAAGTTGGCAATGGAGCTTTTGGAGAAGGAGAATCTGTTAGGGTTAACAGAATTGGATGGTGAAGAATCTCCTTCTTGGGGAGAGAGCTCAACAGGGAAGGTTGCTGGTGGAAGCCTCGCGACTACACTTTTGGCTTCGAAATTTGCTAAAAACACCAGAAGAGGGGCACATCATCAGAAAGTGACAATCCCTGACGAAAGCAGCTTGAAGATGCCGAAGCTGTTTAAGCCTTCAGACCCTGACTTCTTAGTAGACCACGAAGATTAG 2052 0.461 MMMNRYAASSSTRLLRSHFSKSFSLRKKVPWWYQILDPKSEFVDRWNRTFLYASFLALFLDPLYFYFPIIGKENCMKIDLPLGVFVTFFRTLNDIFFVFHIVLKFRTAYFSSHSFGRGDLITDPYLIAIRYLKTDFSFDFLACLPLPQIVIWFIIPAFKHTTAAHANHTLSLMVLVQYIPRFFQIFPLQRRIIKTSGLIAKTALAGSLYNLGFYVLASHVLGAAYYLLAIHRQSQCWRETCAKEANATHSPSCSPQFLDCESLSDPARDAWYQQTFLTVVCDAKNEDSHFEFGIYADAFTDEVATSRFIERYFYCLWWGLKSLCAYGQNLNTSVFVSESLFASFICIAGLILFALLIGNMQNYWQSTTARLEEWRIKQRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEEIILRSLPLDLRRQIQRHICLALVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYIVREGDPVKEMIFIIRGQVESSTTDGGRTGFFNSITLRPGDFCGEELLTWALATTSSSLPSSTRTVRTLTELEAFALRAEDIRFFGIQFKRLHSKKIQHAFRYYSHQWRAWGACFIQAAWRRHVKKKLAMELLEKENLLGLTELDGEESPSWGESSTGKVAGGSLATTLLASKFAKNTRRGAHHQKVTIPDESSLKMPKLFKPSDPDFLVDHED 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1647 683 Gene3D Jelly Rolls 441 560 IPR014710 -
Prci9g1647 683 SUPERFAMILY Voltage-gated potassium channels 38 365 - -
Prci9g1647 683 Gene3D Helix hairpin bin 369 434 - -
Prci9g1647 683 SMART cnmp_10 443 573 IPR000595 -
Prci9g1647 683 MobiDBLite consensus disorder prediction 645 683 - -
Prci9g1647 683 Pfam Ion transport protein 46 370 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci9g1647 683 ProSiteProfiles cAMP/cGMP binding motif profile. 443 517 IPR000595 -
Prci9g1647 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 22 676 - -
Prci9g1647 683 Pfam Cyclic nucleotide-binding domain 466 552 IPR000595 -
Prci9g1647 683 CDD CAP_ED 443 573 IPR000595 -
Prci9g1647 683 FunFam Cyclic nucleotide-gated ion channel 1 370 434 - -
Prci9g1647 683 SUPERFAMILY cAMP-binding domain-like 372 563 IPR018490 -
Prci9g1647 683 Gene3D - 68 366 - -
Prci9g1647 683 FunFam Cyclic nucleotide-gated ion channel 1 441 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1647 Prci-Chr9 28825543 28828518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1647 16 677 Ion Channels AT3G48010 62.996 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1647 K05391 - gmx:100783672 969.533