Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1646 ATGCCGGCACCAAACGTTGGTCATGCTTATTGCTCTGCCTTTTGGCTCACTTCTAGTTCTAGAGGATCATTCCCTGACGCTGTCAATAGAAAAAAAAAAAAATGCACAAGATTACAAGATGTTTGTTGTTATATCAGCCATTTGGCAATGCAATTCCTTAGCTTAGACAACCTTCGTCATATTTCACAACTCGGATCTTCCAAACCCCACCACCGTAAAGAAAGAAAACTTTCAGTGCAGAGCCAAATGGGTCGAAATCGAAATCCTATGTGGGTGCTCTTCATGGTGGTGTTCCCGTTCCTTCCAATGGCTCAGACAGAGGATGAGGAAGTGAAGCAGGCAATGTTGAGATTCATGGAGAAACTTGAACCCATGAATACACCTAGAAATATGAACTGGGGTTGGAACATGTCTTCAGACCCTTGCATTGACAGATGGTATGGGGTTCAATGTTATTCAAGAGCAAGATTTGTGAAGAACATAGTTCTCGAGGATTTTGGTTTCACGGGGATCTTAGATGCCGCTTCTCTCTGCACAGTGCAGCTTCTTCAAGGCCTTAGCTTGAAGAACAACAACTTACATGGCCTCATCCCTGAGGAAATAGAAATGTGCAAAGCATTGAGTCTTCTGTATTTAAGTGGCAACAATTTCTCCGGCGACCTTCCTCTTTCTATTTCACTGTTAGGTAATCTGAAAAGGATCGATGTTTCCGATAACAACTTGTCCGGAGACCTTCCTGATATGAGTCATATTACAGGGTTACAATCTTTTCGAGCCCAGAACAACAAATTCACAGGAGAAATTCCCAACTTTGTTTTCTCCAACCTGGAGGAGCTCAATCTCTCCAGCAACAATTTGCAGGGTCCAATTCCTGACGTGATAAGCTTGTTTGGAGCAGACAGCTTTTCTGGTAATCCCAACTTATGTGGACCCCCACTTGAAAACAAATGTCCTTCTCTTCCTCCTCCTGCAATACATAAGAAGCACAGCGGAAAATCTCTCGGTCGTAGCTTGGCCATTTATTCTGGGTTCGTGATTCTTGGTGTGCTCGTCCTGCTTTACTTGACATTCAAGATTGTCAAGCGTTACAGAGCCAAAAAGGAGCCATTGAATGTGGAGAAGGAGGAAGTGAGGAAGGAAGCTAGCAAGGTAAAGTCTCCAGAATGTTCCAATGAAGTAAATGGGATTGTGATGAGATCAGAGTATTCAGTGTCATCTGTTGAGGCAGGGATGACGTCAATAAATCTGGTGGTTCTCAAGAGTCCAGTTGTGAGGGCACTGAGATTTGAGGACTTGCTGAGAGCTCCTGCAGAATTGGTAGGGAGAGGCAAGCACGGAAGCCTGTACAAGGTGATGCTGGACAGTGGGATGGTTTTAGCAGCGAAGAGAATCAAAGATTTGGGAATTTCAAAACAAGATTTTGAGAAGAGGATGCACAAGTTAGACCAAGTGAAGCATCCCTGTGTACTGCCTCTTCTTGCATTTTATTGCTCCCAGCAAGAGAAGCTTCTGGTTTATGAGTTTCTGTTTAATGGCAGCCTCTTCAAGATGCTACGTGGATCTCAGAGTGGCAAAACTTTTGGCTGGGGAAGCAGACTAAATGTTGCAGCGAACATAGCTGAAGCCTTGGCTTACATGCACGAGGAGCTTCGTGAAAGTGGGATAGCTCACGGAAACTTGAAATCCAGGAACATACTGTTTGACAAGAACATGGATCCATGCCTTAGCGAGTATGGATTAATGGTGGTTGAGGATCAAGATAAACCTGTCTTTTACAAAAGCAGCATGAAGAACAGAAATAGCAGAAATCCCAGTGGCGGTTCCGGAGCTGAAGCTTATAGCACCTTCAAGGTGGACACATATGCGTTTGGTGTGGTGCTTCTTGAACTTTTGACGGGAAAAGTGGTTCAGAATAACAATGGGTTTGATCTGGTTCGGTGGGTAAACTCAGTGGTGAGAGAGGAATGGACGGTTGAAGTATTTGACAAGTGTTTGACGACAGAGGAAGCTAATGAAGAGAGGATGATGACCTTGTTGCAGATAGCACTGAAATGCGTGAGTGCTTATCCGAATGAGAGGCCAAATATGAGTGAAGTTGCAGTGATGACGATTTCTTTGAAGGAGGAGGAAGACAGATCCATAACTTTTAACCCCTGA 2157 0.4418 MPAPNVGHAYCSAFWLTSSSRGSFPDAVNRKKKKCTRLQDVCCYISHLAMQFLSLDNLRHISQLGSSKPHHRKERKLSVQSQMGRNRNPMWVLFMVVFPFLPMAQTEDEEVKQAMLRFMEKLEPMNTPRNMNWGWNMSSDPCIDRWYGVQCYSRARFVKNIVLEDFGFTGILDAASLCTVQLLQGLSLKNNNLHGLIPEEIEMCKALSLLYLSGNNFSGDLPLSISLLGNLKRIDVSDNNLSGDLPDMSHITGLQSFRAQNNKFTGEIPNFVFSNLEELNLSSNNLQGPIPDVISLFGADSFSGNPNLCGPPLENKCPSLPPPAIHKKHSGKSLGRSLAIYSGFVILGVLVLLYLTFKIVKRYRAKKEPLNVEKEEVRKEASKVKSPECSNEVNGIVMRSEYSVSSVEAGMTSINLVVLKSPVVRALRFEDLLRAPAELVGRGKHGSLYKVMLDSGMVLAAKRIKDLGISKQDFEKRMHKLDQVKHPCVLPLLAFYCSQQEKLLVYEFLFNGSLFKMLRGSQSGKTFGWGSRLNVAANIAEALAYMHEELRESGIAHGNLKSRNILFDKNMDPCLSEYGLMVVEDQDKPVFYKSSMKNRNSRNPSGGSGAEAYSTFKVDTYAFGVVLLELLTGKVVQNNNGFDLVRWVNSVVREEWTVEVFDKCLTTEEANEERMMTLLQIALKCVSAYPNERPNMSEVAVMTISLKEEEDRSITFNP 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1646 718 FunFam Nuclear pore complex protein NUP107 108 270 - -
Prci9g1646 718 ProSiteProfiles Protein kinase domain profile. 434 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1646 718 Gene3D Ribonuclease Inhibitor 108 273 IPR032675 -
Prci9g1646 718 Gene3D Phosphorylase Kinase; domain 1 407 508 - -
Prci9g1646 718 ProSitePatterns Protein kinases ATP-binding region signature. 440 462 IPR017441 GO:0005524
Prci9g1646 718 PANTHER OS05G0588300 PROTEIN 92 706 - -
Prci9g1646 718 SUPERFAMILY L domain-like 132 313 - -
Prci9g1646 718 Pfam Protein kinase domain 438 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1646 718 ProSiteProfiles Leucine-rich repeat profile. 275 297 IPR001611 GO:0005515
Prci9g1646 718 Gene3D Transferase(Phosphotransferase) domain 1 510 716 - -
Prci9g1646 718 Coils Coil 360 380 - -
Prci9g1646 718 Gene3D Ribonuclease Inhibitor 274 317 IPR032675 -
Prci9g1646 718 SUPERFAMILY Protein kinase-like (PK-like) 438 702 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1646 Prci-Chr9 28816293 28818874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1646 135 699 Receptor kinase-like Gene Family AT1G68400 35.644 8.26e-95 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci9g1646 Pkinase 4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1646 - - pcin:129319179 1429.85