Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1641 ATGGAATTCAAGCGCTTCTTGTTGGAATCGATTCCATTTGTAGCCATGGTGATGGTGGAGTGCTTGGACGTGGGAATGACCACCTTAAGTAAAGCAGCCATGTCCAGAGGAATGAGCCACTTCGTCTTCGTCGTCTACTCAAATGCCCTCGCCTCAGCCATACTCCTTCCTTCCTCTTTCTTCTTCAACAGGAAAAACGGGCCTCCGCTTTCTCTCTCGCTTCTAGGAAAATTCTTCCTCCTCAGTCTTGTTGGGATAACTGTGATGCAGAATTGTGTTTTCACTGGTATAAACTACAGCTCGCCCACTCTCGGATCTGCTATGAGCAACTTGGTTCCAGCCTTCACTTTTGTGCTTGCGGTCATCTTCAGGATGGAGACGCTAGATATTAGAAGCTCAAAAAGCCAGATGAAAATATTGGGCACAGTGGTGTCCATCTCGGGAGCATTGATCGTGACCCTTTACAAGGGAGCTTCCATTGGCAAATCTCCAATTCATTCCCCTGAAAATCCTTCTCAGTCCTTGTCGGAGCAAACAAACAACTGGGTGATTGGGGGTCTCTTCCTTGCAACAGCCGGTTTATCTCTTGCAGTCTGGAGCATTTCTCAGGCAGCTATTCTTAGAGGATATCCATCTGAGTTGACCATAGTGGCCTTCTATTGCCTCTTTGGAACAATCCAATGCAGCATCCTTTCTCTGATAGTAGTCAGAGATCCCAATGCATGGACACTTAGGCCTGACATTGAGCTCATCTCCATTATCTATTCAGCGATCTTTGGGAGTGTGGTGACATTTTCTGTGCTCACGTGGTGCATACACAAGAAAGGACCAGTATTTGTGGCCATGTTCAAGCCTGTGGGGATTGCAATTGCTGCATTGATGGGTGTGGCCTTCCTTGGGGACACACTCTATGTTGGCAGTATTATTGGAGCAATAATAATCGTTATCGGGTTCTACACAGTATTGTGGGCACAATCCAAAGAGGAAAATGAGAACTCAAGTAAAGTTTACAAGCAACCATCCTCATCATCACAAAGGAGACCTCTACTAGAAAGTCATCTTGATGAAGCAAATATTTTAACATAA 1086 0.4549 MEFKRFLLESIPFVAMVMVECLDVGMTTLSKAAMSRGMSHFVFVVYSNALASAILLPSSFFFNRKNGPPLSLSLLGKFFLLSLVGITVMQNCVFTGINYSSPTLGSAMSNLVPAFTFVLAVIFRMETLDIRSSKSQMKILGTVVSISGALIVTLYKGASIGKSPIHSPENPSQSLSEQTNNWVIGGLFLATAGLSLAVWSISQAAILRGYPSELTIVAFYCLFGTIQCSILSLIVVRDPNAWTLRPDIELISIIYSAIFGSVVTFSVLTWCIHKKGPVFVAMFKPVGIAIAALMGVAFLGDTLYVGSIIGAIIIVIGFYTVLWAQSKEENENSSKVYKQPSSSSQRRPLLESHLDEANILT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1641 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Prci9g1641 361 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Prci9g1641 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Prci9g1641 361 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Prci9g1641 361 Pfam EamA-like transporter family 25 153 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1641 Prci-Chr9 28794858 28796942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1641 1 359 Nodulin-like Gene Family AT3G28050 46.011 1.12e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1641 - - qsa:O6P43_030898 486.878