Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1617 ATGGGCAATGATGTTCTCCGGCTGGAAGACTTGCCTTGCAGCTCCGGTGACCTGCATGTTCTCGCCGTCGATGATAGTTATGTCGATCGCAAAGTCATTGAGCGCTTGCTGAAAATTTCTTCTTTTAAAGTGACGGTTGTGGAGAGTGGGACAAGAGCTCTTGAATATTTAGGATTGGATGGACAGAAGAGCTCCATTGGATTTGAGAGTGTCAAGGTTAATCTGATAATGACGGACTATTCCATGCCCGGGATGACAGGTTATGAGCTGCTCAAGAAGATTAAGGAATCATCTATGTTTAGAGAGATACCAGTAGTGATCATGTCGTCTGAGAATATCTTGACTCGAATTGATAGGTGCTTAGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGACGTGAAACGATTGAAAGAATTCATAATGAAGGGTGAAGGGAAGGAAAGTAGAGAGAAAGAATGTCGCAAAAGAAAGAGATCAGATAATTATAGTGCACTTCCTCCAACTCCATTCTCATCGGTCTGTTGTCCTTGTGATCCATCATCCTCTTCACCATCTGCATTGTCCTCAAAGAAGTCTAGATTGCTAGCAGAGGTTGAATAA 615 0.4341 MGNDVLRLEDLPCSSGDLHVLAVDDSYVDRKVIERLLKISSFKVTVVESGTRALEYLGLDGQKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSMFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFIMKGEGKESREKECRKRKRSDNYSALPPTPFSSVCCPCDPSSSSPSALSSKKSRLLAEVE 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1617 204 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Prci9g1617 204 Gene3D - 18 176 - -
Prci9g1617 204 CDD REC_typeA_ARR 20 141 - -
Prci9g1617 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 198 IPR045279 GO:0009736
Prci9g1617 204 Pfam Response regulator receiver domain 20 138 IPR001789 GO:0000160
Prci9g1617 204 SUPERFAMILY CheY-like 17 143 IPR011006 -
Prci9g1617 204 SMART REC_2 18 142 IPR001789 GO:0000160
Prci9g1617 204 MobiDBLite consensus disorder prediction 151 166 - -
Prci9g1617 204 MobiDBLite consensus disorder prediction 151 204 - -
Prci9g1617 204 MobiDBLite consensus disorder prediction 169 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1617 Prci-Chr9 28695299 28697829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1617 18 170 Response Regulator Gene Family AT3G48100 74.194 8.29e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci9g1617 Response_reg 4.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1617 K14492 - qsa:O6P43_030919 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1624 5 34999031 35000488 Prci9g1617 9 28695299 28697829 ECH
Prci9g1617 9 28695299 28697829 Prci9g1617 9 28695299 28697829 ECH