Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1616 ATGGGCAATGATGTTCTCCGGCTGGAAGACTTGCCTTGCAGCTCCGGTGACCTGCATGTTCTCGCCGTCGATGATAGTTATGTCGATCGCAAAGTCATTGAGCGCTTGCTGAAAATTTCTTCTTTTAAAGTGACGGTTGTGGAGAGTGGGACAAGAGCTCTTGAATATTTAGGATTGGATGGACAGAAGAGCTCCATTGGATTTGAGAGTGTCAAGGTTAATCTGATAATGACGGACTATTCCATGCCCGGGATGACAGGTTATGAGCTGCTCAAGAAGATTAAGGTGGAATCATCTATGTTTAGAGAGATACCAGTAGTGATCATGTCGTCTGAGAATATCTTGACTCGAATTGATAGGTGCTTAGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGACGTGAAACGATTGAAAGAATTCATAATGAAGGGTGAAGGGAAGGAAAGTAGAGAGAAAGAATGTCGCAAAAGAAAGAGATCAGATAATTATAGTGCACTTCCTCCAACTCCATTCTCATCGGTCTGTTGTCCTTGTGATCCATCATCCTCTTCACCATCTGCATTGTCCTCAAAGAAGTCTAGATTGCTAGCAGAGGTTGAATAA 618 0.4353 MGNDVLRLEDLPCSSGDLHVLAVDDSYVDRKVIERLLKISSFKVTVVESGTRALEYLGLDGQKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKVESSMFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFIMKGEGKESREKECRKRKRSDNYSALPPTPFSSVCCPCDPSSSSPSALSSKKSRLLAEVE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1616 205 CDD REC_typeA_ARR 20 142 - -
Prci9g1616 205 SUPERFAMILY CheY-like 17 144 IPR011006 -
Prci9g1616 205 MobiDBLite consensus disorder prediction 152 167 - -
Prci9g1616 205 MobiDBLite consensus disorder prediction 170 196 - -
Prci9g1616 205 MobiDBLite consensus disorder prediction 152 205 - -
Prci9g1616 205 Gene3D - 18 177 - -
Prci9g1616 205 Pfam Response regulator receiver domain 20 139 IPR001789 GO:0000160
Prci9g1616 205 SMART REC_2 18 143 IPR001789 GO:0000160
Prci9g1616 205 ProSiteProfiles Response regulatory domain profile. 19 147 IPR001789 GO:0000160
Prci9g1616 205 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 198 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1616 Prci-Chr9 28695277 28697841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1616 18 171 Response Regulator Gene Family AT3G48100 73.718 5.07e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci9g1616 Response_reg 1.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1616 K14492 - qsa:O6P43_030919 244.202