Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1608 ATGTCTCACACCTGCACCGCAGCCGATCCTGCCGTAAGCGCCGATGGTGATGGTTCGGCCGGAGAGATCATGCTGTTTGGGGTTAGAGTCGTGGTGGATTCCATGAGGAAGAGCGTGAGTATGAATAATCTCTCTCAGTACGAGCATCCTCAGGATGCCGCGAACAATAATAACGGCAACAAGGAAGATGCTCTGGCTGCCGGCTATGCCTCTGCCGATGAAGCTGCTGCTCATAATTCTGGCAGGCATCGCGAGCGTGAGCGTAAGCGAGGAGTTCCATGGACGGAAGAAGAGCACAAACTGTTCTTGCTAGGATTGCAGAAAGTTGGGAAAGGTGATTGGAGAGGGATCTCAAGGAACTACGTGAAAACTCGGACGCCTACACAGGTTGCGAGCCATGCTCAGAAGTACTTTCTCCGGCGAAGCAACCTCAATCGCCGACGCCGCAGATCCAGCCTTTTCGATATCACCACCGACACGGTCTCTGCAATCCCAGTGGAAGAACAGATCCAGCATCAAGATTACGTGTCTCATTCAAATCCTGTGTGTCCTGCAACCCCAGAAACTAACTACGTAAATGGATTTCCGATGATGCCGATGTATCCGATGGGTGTTTCTGGAATGATTTCAGTCCCAATTTCGAATTCAATAGAAAAACTTACTCCAGGGCAAGGAACGGTGGAAGGAAATGGGCAACCCCAGCTACTTCGATCAATTACTGTTCTTTCAGATCCTAAAGCTTCTGAGGCGTCCAATATCACATCGACTTCGAGTTCAGCTGTGGATCCACCAACGTTGTCTCTCGGGTTATCCTTATCTTCTGATCAAAGACAAACTTCATCAAGGCATTCATCTATACTTACTATGCCGTGTTTCAACAATGGAGATAACATCATAAGTGTTGCTTGA 909 0.4873 MSHTCTAADPAVSADGDGSAGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDAANNNNGNKEDALAAGYASADEAAAHNSGRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPVEEQIQHQDYVSHSNPVCPATPETNYVNGFPMMPMYPMGVSGMISVPISNSIEKLTPGQGTVEGNGQPQLLRSITVLSDPKASEASNITSTSSSAVDPPTLSLGLSLSSDQRQTSSRHSSILTMPCFNNGDNIISVA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1608 302 CDD SANT 93 138 IPR001005 -
Prci9g1608 302 SMART sant 90 140 IPR001005 -
Prci9g1608 302 FunFam transcription factor MYB1R1 92 143 - -
Prci9g1608 302 MobiDBLite consensus disorder prediction 73 92 - -
Prci9g1608 302 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Prci9g1608 302 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Prci9g1608 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Prci9g1608 302 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Prci9g1608 302 MobiDBLite consensus disorder prediction 77 92 - -
Prci9g1608 302 Gene3D - 92 144 - -
Prci9g1608 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Prci9g1608 302 PANTHER TRANSCRIPTION FACTOR KUA1 3 244 - -
Prci9g1608 302 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Prci9g1608 302 MobiDBLite consensus disorder prediction 250 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1608 Prci-Chr9 28632663 28634784 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci9g1608 Myb_DNA-binding 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1608 - - aip:107632799 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2943 4 41211991 41214159 Prci9g1608 9 28632663 28634784 CCT
Prci9g1608 9 28632663 28634784 Prci9g1608 9 28632663 28634784 ECH