Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1606 ATGGTGTCCACGTCGCAGAAGAAAAACCTTCACTCCCTCCTTGCTGCAAACCTTGGCAAGCTCACCATACCTTCCTCCTCCTCCTCCTCCTCCACCACCACGCACCATGATTTTGACTTTCTGCCTTTCTCTTCTCACGATCCCAATCCATCCCCGTCCACTGCCATTCCTGGGAGCCCACAAGTTATCCAGAGTAGGTCCCACTCCTTTGTGGGACCTTCCCCACTGTTCGCTCAGTCCTCCAATTCCCTGGCGTTTCTTGATGAACTCGATTCCCAGAGCGATGACGAGGCTGAAATTGATGCCCTGAGTGGGTTAGGAAGTGATTGTGCGGTTGGCGAAAAGCAAGTGGGTGTGCGTGATTCTGGAGAGGAATTGGCCTGCAAAATTGGACCTGGGGATTTTCAAATTTTGAGAGTTGTGGGGCAGGGCGCGTTCGGGAAGGTCTTTCAGGTAAGGAAAAAGAGTGACCGTGTGGATGGAGAGGGGGATGGTGGTGGTGGTAATGGTGATAGCATTTTTGCAATGAAGGTGATGCGGAAGGAGACGATCATAAAGAAGAATCACGTCGATTATATGAAAGCCGAGAGAGATATTCTCACTAAAGTGGTTCATCCTTTTATCGTTCAGCTCCGGTACTCTTTTCAGTCTAAATCTAAATTATATTTGATCTTGGACTTTATAAATGGAGGACATCTCTTCTTTCATCTGTATAGGCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTATCTGCTGTTTCCCATCTTCACAAGTGTGGGATCGTGCATCGGGATCTTAAACCTGAAAATATCCTTATGGACGCTGACGGGCATGTAATGGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGGAGATCTAATTCTTTATGTGGGACCACAGAATACATGGCTCCAGAAATCTTACAGGCTAAAGGCCACAACAAGGAAGCAGATTGGTGGAGCACCGGTATACTGTTGTATGAAATGCTAACAGGGAAGCCCCCATTTACACATGCTAACAGAAAGAAACTTCAAGAGAAAATTGTTAGAGAGAAAGTGAAACTTCCACCATTCCTGAGTGGTGAAGCCCACTCTTTGCTTAAAGGATTGCTGCAAAAGGATCCATCAAAAAGGTTGGGCAATGGACCGAATGGAGACAACCAGATCAAAAGTCACAAGTGGTTTGGCTCAATCAATTGGAAGAAACTGGAGGCAAGAGAGCTGCAGACAAAATTCAAACCAGATGTGAGTGGGTTAGACTGTACAGCTAATTTTGATCAATGCTGGACCTCAATGTCTCCTGTTGATTCACCAGCACCCACACCCACAGCATCTGACTATTTCCAGGGCTATACTTACGTGGCACCGAACCCTTGGCTTTCATCTAGCTAG 1425 0.4625 MVSTSQKKNLHSLLAANLGKLTIPSSSSSSSTTTHHDFDFLPFSSHDPNPSPSTAIPGSPQVIQSRSHSFVGPSPLFAQSSNSLAFLDELDSQSDDEAEIDALSGLGSDCAVGEKQVGVRDSGEELACKIGPGDFQILRVVGQGAFGKVFQVRKKSDRVDGEGDGGGGNGDSIFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQSKSKLYLILDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHKCGIVHRDLKPENILMDADGHVMVMLTDFGLAKEIDESGRSNSLCGTTEYMAPEILQAKGHNKEADWWSTGILLYEMLTGKPPFTHANRKKLQEKIVREKVKLPPFLSGEAHSLLKGLLQKDPSKRLGNGPNGDNQIKSHKWFGSINWKKLEARELQTKFKPDVSGLDCTANFDQCWTSMSPVDSPAPTPTASDYFQGYTYVAPNPWLSSS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1606 474 SUPERFAMILY Protein kinase-like (PK-like) 133 467 IPR011009 -
Prci9g1606 474 PANTHER RIBOSOMAL PROTEIN S6 KINASE 74 468 - -
Prci9g1606 474 Gene3D Phosphorylase Kinase; domain 1 134 450 - -
Prci9g1606 474 FunFam Non-specific serine/threonine protein kinase 133 250 - -
Prci9g1606 474 ProSiteProfiles AGC-kinase C-terminal domain profile. 407 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci9g1606 474 FunFam Non-specific serine/threonine protein kinase 228 425 - -
Prci9g1606 474 MobiDBLite consensus disorder prediction 24 39 - -
Prci9g1606 474 Pfam Protein kinase domain 135 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1606 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Prci9g1606 474 SMART serkin_6 135 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1606 474 MobiDBLite consensus disorder prediction 24 67 - -
Prci9g1606 474 MobiDBLite consensus disorder prediction 46 67 - -
Prci9g1606 474 ProSiteProfiles Protein kinase domain profile. 135 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci9g1606 474 SMART pkinase_C_6 407 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci9g1606 474 Pfam Protein kinase C terminal domain 427 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Prci9g1606 474 Gene3D Transferase(Phosphotransferase) domain 1 228 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1606 Prci-Chr9 28622847 28627057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1606 60 467 AGC Kinase Gene Family AT3G08720 61.259 4.16e-179 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Prci9g1606 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1606 K04688 - qsa:O6P43_022772 697.967