Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1604 ATGGATCCTCCTCTCATCAACGAGTCTACATTCTCCTCCGCTAACCCTTCTGCCTATAGTCTCGCAGAGATTTGGCCTTTCCCTGGGGACCACCCGGCCGGACCCGGATTGGGTCTCCGGATGCCCCATTTAGGTCACAATTTCGGCTCCATTCCCGATAATTCCCTCCATCGAGATGCCTCCGCAGAGGAGTCCACCGTCACCGAGCAGAGCGGCGGCGGCGCCGCTGCCGCCAGTGGAAATCATAGGAAGAGGAAAGATGCCACCTCTGAGGACGAGTCCTCAAAGATGGTTTCCATGACTAGTGCCAGTGATTTGAATGATTCTGGCAATAAACGGATAAAATTAGGAGCATCCAAGGATGAAAATGGTGGTCTGAAGGCTGAAGCAGAAGCAAGTTCAGTAGGTGGTAGCAAGTCAGCTGAACCAAGCATTAAACCTCCTGAGCCACCTAAGCCGGACTATATACATGTAAGAGCGAGAAGAGGCCAAGCAACTGATAGCCATAGTCTTGCAGAAAGAGCAAGAAGGGAAAAGATCAGCGAGAGGATGAAGATTCTTCAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATCAATTATATTCAATCGCTGCAGCGGCAGGTTGAGTTCCTTTCGATGAAGCTTGAAGCAGTTAATTCGAGAATGAACATGAACCCCACTATTGAAGGGTTCCCTTCAAAAGATCTTGGTGCTCAGGCATTTGATGTTGCTGGAATGATATTTGGATCACAATCAGGCAGGACGTATGCTCAGGGAACACAACTCGGATGGCTGCATATGCAGATAGGTGGTGGTTTCGAGAGAGCAACATAG 864 0.4896 MDPPLINESTFSSANPSAYSLAEIWPFPGDHPAGPGLGLRMPHLGHNFGSIPDNSLHRDASAEESTVTEQSGGGAAAASGNHRKRKDATSEDESSKMVSMTSASDLNDSGNKRIKLGASKDENGGLKAEAEASSVGGSKSAEPSIKPPEPPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMNPTIEGFPSKDLGAQAFDVAGMIFGSQSGRTYAQGTQLGWLHMQIGGGFERAT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1604 287 CDD bHLH_AtBPE_like 154 237 - -
Prci9g1604 287 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 65 257 IPR024097 GO:0006355
Prci9g1604 287 SMART finulus 170 220 IPR011598 GO:0046983
Prci9g1604 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 234 IPR036638 GO:0046983
Prci9g1604 287 Pfam Helix-loop-helix DNA-binding domain 168 215 IPR011598 GO:0046983
Prci9g1604 287 FunFam Basic helix-loop-helix transcription factor 161 234 - -
Prci9g1604 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 214 IPR011598 GO:0046983
Prci9g1604 287 MobiDBLite consensus disorder prediction 50 151 - -
Prci9g1604 287 MobiDBLite consensus disorder prediction 94 109 - -
Prci9g1604 287 Gene3D - 161 238 IPR036638 GO:0046983
Prci9g1604 287 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1604 Prci-Chr9 28611906 28615977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1604 1 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 55.782 3.83e-90 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci9g1604 HLH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1604 - - zju:107418528 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1604 9 28611906 28615977 Prci9g1604 9 28611906 28615977 ECH