Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1600 ATGGTGAGGCCTCCATGCTGCGAGAAGATCAGTGTTAAAAGGGGCGTTTGGACTCCGGAAGAAGATGCTAAGATGATAGCATTTGTCTCAAAGCATGGGTCTGGTAACTGGACATCTGTTCCCAAAAAAGCAGGTTTGAAGAGGTGTGGGAAAAGTTGCAGGCTCAGGTGGACTAATTACCTCAGGCCAGATCTCAAGCATGATAGCTTCACACCCCAAGAAGAGGATTTAATCCTTAAACTTCACGCAGCCATTGGAAGCAGGTGGTCTATGATTGCCCAGCAGCTTCCTGGTAGAACAGACAACGATGTAAAGAATTACTGGAACACAAAGCTGAAGAAGAAGCTCACAGACATGGGAATAGACCCTATCACTCACAAGCCCTTCTCTAAACTCCTAGCTGATTATGGAAACATTGGGGGAATCAAGAAACCAAGCACCCGAATCGGGTCTCTCAGTAAAGACTTCAAGAACGCAGTATCGTTCAAATCAGACTCGTTTCCAAAGCTACCTTCAACCTCACCAAAGCTGGAACCATCAACAGAAAGTAGCTTTTTCAGTAACACACACGTGATGGAGAAGGAGATAATCCCAGCAGCTATATTTGGGGAAGGCTTCTTCTCGTCAATTTCTTCACCGTCTTCTTCTTCTTCTTCTATTTGTTGTTCCAATGCTGCCCAGGAAGGCTGGCCTTTTCCCTTTTGCTGGAATGATTTTCTTCTTGAAGATGTTTTCCCACCTGCTGCTGATAACCCAGAGAACGAAAATTCAACAACGAACGAGAATAAGAATGAGGTGACGTCACTGCAAGTTCCCAGAAGTGACGTTCGGAATTCATCGTCATCCTCTGAGATTTCCTTCGTAGAAGCCATGCTCGATCAAGAAAATGAGATGTTCTTGAATTTTCCTCACCTCATGGAGGAACCGTCCAACTACTGA 939 0.4505 MVRPPCCEKISVKRGVWTPEEDAKMIAFVSKHGSGNWTSVPKKAGLKRCGKSCRLRWTNYLRPDLKHDSFTPQEEDLILKLHAAIGSRWSMIAQQLPGRTDNDVKNYWNTKLKKKLTDMGIDPITHKPFSKLLADYGNIGGIKKPSTRIGSLSKDFKNAVSFKSDSFPKLPSTSPKLEPSTESSFFSNTHVMEKEIIPAAIFGEGFFSSISSPSSSSSSICCSNAAQEGWPFPFCWNDFLLEDVFPPAADNPENENSTTNENKNEVTSLQVPRSDVRNSSSSSEISFVEAMLDQENEMFLNFPHLMEEPSNY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1600 312 MobiDBLite consensus disorder prediction 247 281 - -
Prci9g1600 312 CDD SANT 69 112 IPR001005 -
Prci9g1600 312 PANTHER F14D16.11-RELATED 1 312 - -
Prci9g1600 312 SMART sant 66 114 IPR001005 -
Prci9g1600 312 SMART sant 13 63 IPR001005 -
Prci9g1600 312 FunFam Os07g0634900 protein 69 128 - -
Prci9g1600 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Prci9g1600 312 CDD SANT 17 61 IPR001005 -
Prci9g1600 312 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci9g1600 312 MobiDBLite consensus disorder prediction 251 281 - -
Prci9g1600 312 Gene3D - 7 67 - -
Prci9g1600 312 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci9g1600 312 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Prci9g1600 312 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci9g1600 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Prci9g1600 312 Gene3D - 68 128 - -
Prci9g1600 312 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci9g1600 312 FunFam Transcription factor RAX3 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1600 Prci-Chr9 28593504 28595260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1600 1 308 MYB Transcription Factor Family AT3G28470 44.720 1.62e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci9g1600 Myb_DNA-binding 3.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1600 K09422 - gmx:100795381 370.548