Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1595 ATGAGAAACTTTCTGGAGGTTATCTTCCCTGCATTGGATGTACCTGTGAAAAATGTGGTATGTACTTATTCCCTTGAACATAATTGCATCGATGAAGTCTTCAGCTCAATCTTTCACTATTTAGATGAGTTGATGGATCCAAATGAGAATATTTCCAAGCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTTCAGCATATGCAGAAGGAAGAAGAACAGGTTTTTCCTCTCTTGATGCAGAAAGTTTCTATCGACGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTGCGGGAAATTTTGCCATGGATGGTATCCTTTCTTTCTGCAGAAAAACAAGCCGAAGTTCGGAAGTTTTTAAATGAAATTACACCAATGGAAAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTAGCAACACCCAAACCTTCAACCAGGACTGTTCTATGAATGAAGCTGTTCAACGTGCTGATGGATCCCAACATATGAAAAGACCGCGATGGTTGAGTTGTTGCAATACGAATTTTAAAGCCGTTTCAAATCAGATGAAAGCAAATTGCTCAGACATAGAAGATAGAGCCAATCAAGTTAATATTCTTCACCTTTGGCATAATGCCATTAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGGAACAACACCTGTTTTCATAATTTGGATTCATTACTCATCCAACTAAAATTCTTCGCTGATGTTCTCATCTGCTACAGTAATGCTCAGAAGAAATTCTTTTACCCGGTTTTGAGTGAACTTGCTTACGGCTGGTTGACCAAGTCTACTGAACAATTTTTCGGTGAAAGTCACGTTGAAGATTTACAGCAGTTGCTATTGTGTAATGCTGAGAACAGTATGCCTTCGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGGGCTATTTGTGGCACGAATCAACAAACAATTTGCTTTTCAAGAAACAGAGGTATTTCCTGTCATTCGATTGAACTGCAGCAACGGAACGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGCGATAACTTGGTTCGCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAATGCCATAAAACAAGGAAATACTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTTATTCAGGTAAAACTTCCATTGAAAAATTCCGACAAGACTTGCGACATATATTCAAAAGCAAAAGCTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCAGGTTTTCTTTCTTAAATCATGACAAGCCTCATAAAATATCTACCGGAAATAATGGTTTCTCTTATTCATCATCTTCCGGATTCAGCAATGTGACCAAGTATGAGACGCCATACTCTACGGGAATTAATATGCATATATTTTTCCCTGCCACGGTTATGAAGTTAAATCACCGTCCTGGATTTCAGGCAGCTAATAGTTCTCCTGTTCCCTGGCTTGATGATTCAAAGCCTATTGATCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCTTGGATCAGCTCGGATAGAAAAGAATGTTGAGATGCTTGTGAATTTCAACAAACGATTTCATCTAATACGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCTTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTTTCCTATACGATTGATCACAAATTTGAAGTTGAACACTTCAACAAGATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCTAGTTTTGAAACAAATACATGGGAGCAGAGAATGCTGACGCATCATCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAGTCGTGAAGAAACTGAAATTTGGCATTTAATTAGAGAACTGTTCTCCAATAAGGAGCAAATAAAAATCATAGGATGCATGCTTGGAAGAATTAGAGCAGAAATTTTGCAAGATATGATACCCTGGTTAATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAATGGTGGGATGGGTACAGGATAGCAAAGGAGAAAGAGAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAACTACATGAAGAATCCACTTCCAACAAAAGCGAATTTTTTTCACAGAGGGATGATATTGGTGATAATAATGAGCAGTCCCACAATTGCAATCTTCATGGCAAATCTAAGGTTCGTAAAGCAAAACAGATTAGTAGTGAATGTTCAGAATGCAGGAATCAATTGAGTGATAAAAACAAACAAACATGCACTAAATTAACAGATATCACAAGTTCGATCAATGATAAAGGTCAGACTTTTCAATTGTGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAATCCAGATGATCTGGAGATGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATGTATAATTCAGAATCTGCTGATGAGCCGTTGGATTGTTAGACAGCATATCTCTTTTTCGGAAGGCACTGTCACAAACAATGGGCAGGAACTTCCTGGACAGTATCCGTCTTACAGGGACCCTCTCAAATTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTGGCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCAACAGATCATCTGATTGACAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAGCCAATCAGTGCCACATGTTCTACTGTGTCTTGTGGTAACTTAGCTATGGCAAAATACTACTGCAGGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGTCTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGGCTCGTTCCCTTACAGTACATATATGCAGAGAGAAATCATTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCATTCAACATGTTTCAAGGAGTATACCTACTTCAATTATACCTGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGACGCGTACTTGGCTGAAGAAAAAATCCCAGACGAGCATTTGGGTAAAACTCAGATGATTCTATGCAATGACTGTGAAAAGAAAGGAACAGTTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGCGGCTCCTACAACACCAGAGTTCTATGA 3531 0.3908 MRNFLEVIFPALDVPVKNVVCTYSLEHNCIDEVFSSIFHYLDELMDPNENISKLFQELICCIGILQATTFQHMQKEEEQVFPLLMQKVSIDEQALLVWQFICSVPIMLLREILPWMVSFLSAEKQAEVRKFLNEITPMEKELQEVLIAWLGSNTQTFNQDCSMNEAVQRADGSQHMKRPRWLSCCNTNFKAVSNQMKANCSDIEDRANQVNILHLWHNAIKKDMKEMLEELHQIRNNTCFHNLDSLLIQLKFFADVLICYSNAQKKFFYPVLSELAYGWLTKSTEQFFGESHVEDLQQLLLCNAENSMPSSEFVEKLCRELGLFVARINKQFAFQETEVFPVIRLNCSNGTLEELISLSLHMMPLGLLKCAITWFAGHLSENESRSILNAIKQGNTFVHEAFASLVHEWFRVGYSGKTSIEKFRQDLRHIFKSKSSLLTEQVKEAPRFSFLNHDKPHKISTGNNGFSYSSSSGFSNVTKYETPYSTGINMHIFFPATVMKLNHRPGFQAANSSPVPWLDDSKPIDLIFFFHKAIKNDLDYLVLGSARIEKNVEMLVNFNKRFHLIRFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFNKISCILDKMFDLHFSVSSFETNTWEQRMLTHHQLCRKLQEMCKSMHKLLSDHMSREETEIWHLIRELFSNKEQIKIIGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRIAKEKERSNDPPLQTVEPLEIISKYLSKEVLNELHEESTSNKSEFFSQRDDIGDNNEQSHNCNLHGKSKVRKAKQISSECSECRNQLSDKNKQTCTKLTDITSSINDKGQTFQLCENSGHYDHLMKINPDDLEMAIRRVSRDSSLDLQKKSCIIQNLLMSRWIVRQHISFSEGTVTNNGQELPGQYPSYRDPLKLIYGCKHYKRSCKLLASCCNQLYTCIHCHNDATDHLIDRKSITKMMCMKCLKIQPISATCSTVSCGNLAMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMARSLTVHICREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFKEYTYFNYTCPICYKSLGDMQVYFRMLDAYLAEEKIPDEHLGKTQMILCNDCEKKGTVPFHWLYHKCSSCGSYNTRVL 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1595 1176 MobiDBLite consensus disorder prediction 783 798 - -
Prci9g1595 1176 Pfam Ring finger domain 1068 1111 IPR001841 -
Prci9g1595 1176 SUPERFAMILY CHY zinc finger-like 932 997 IPR037274 GO:0008270
Prci9g1595 1176 CDD Hr-like 525 670 - -
Prci9g1595 1176 Pfam CHY zinc finger 941 1016 IPR008913 GO:0008270
Prci9g1595 1176 CDD Hr-like 6 82 - -
Prci9g1595 1176 ProSiteProfiles Zinc finger CTCHY-type profile. 1006 1069 IPR017921 -
Prci9g1595 1176 FunFam RING finger and CHY zinc finger domain-containing protein 1 1140 1176 - -
Prci9g1595 1176 CDD RING-H2_Pirh2-like 1069 1112 - -
Prci9g1595 1176 Gene3D nmb1532 protein domain like 521 690 - -
Prci9g1595 1176 Gene3D nmb1532 protein domain like 6 102 - -
Prci9g1595 1176 Gene3D nmb1532 protein domain like 205 359 - -
Prci9g1595 1176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1063 1113 IPR013083 -
Prci9g1595 1176 MobiDBLite consensus disorder prediction 783 805 - -
Prci9g1595 1176 SMART ring_2 1070 1111 IPR001841 -
Prci9g1595 1176 ProSiteProfiles Zinc finger CHY-type profile. 934 1003 IPR008913 GO:0008270
Prci9g1595 1176 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 567 1176 - -
Prci9g1595 1176 SUPERFAMILY Zinc hairpin stack 1007 1061 IPR037275 -
Prci9g1595 1176 ProSiteProfiles Zinc finger RING-type profile. 1070 1111 IPR001841 -
Prci9g1595 1176 Gene3D - 1141 1176 - -
Prci9g1595 1176 Pfam Zinc-ribbon 1117 1174 IPR039512 -
Prci9g1595 1176 Coils Coil 217 237 - -
Prci9g1595 1176 FunFam Zinc finger protein-related isoform 1 1065 1114 - -
Prci9g1595 1176 SUPERFAMILY RING/U-box 1058 1116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1595 Prci-Chr9 28537224 28545772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1595 6 766 C2H2 Transcription Factor Family AT3G18290 30.751 8.03e-102 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1595 K16276 - gmx:100802706 1684.46