Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1592 ATGCATCATCATGGTTATCTTCCCTGCATTGGATGTACCTGTGAAAAATGTGATGAGTTGATGGATCCAAATGAGAATATTTCCAAGCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTTCAGCATATGCAGAAGGAAGAAGAACAGGTTTTTCCTCTCTTGATGCAGAAAGTTTCTATCGACGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTGCGGGAAATTTTGCCATGGATGGTATCCTTTCTTTCTGCAGAAAAACAAGCCGAAGTTCGGAAGTTTTTAAATGAAATTACACCAATGGAAAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTAGCAACACCCAAACCTTCAACCAGGACTGTTCTATGAATGAAGCTGTTCAACGTGCTGATGGATCCCAACATATGAAAAGACCGCGATGGTTGAGTTGTTGCAATACGAATTTTAAAGCCGTTTCAAATCAGATGAAAGCAAATTGCTCAGACATAGAAGATAGAGCCAATCAAGTTAATATTCTTCACCTTTGGCATAATGCCATTAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGGAACAACACCTGTTTTCATAATTTGGATTCATTACTCATCCAACTAAAATTCTTCGCTGATGTTCTCATCTGCTACAGTAATGCTCAGAAGAAATTCTTTTACCCGGTTTTGAGTGAACTTGCTTACGGCTGGTTGACCAAGTCTACTGAACAATTTTTCGGTGAAAGTCACGTTGAAGATTTACAGCAGTTGCTATTGTGTAATGCTGAGAACAGTATGCCTTCGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGGGCTATTTGTGGCACGAATCAACAAACAATTTGCTTTTCAAGAAACAGAGGTATTTCCTGTCATTCGATTGAACTGCAGCAACGGAACGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGCGATAACTTGGTTCGCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAATGCCATAAAACAAGGAAATACTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTTATTCAGGTAAAACTTCCATTGAAAAATTCCGACAAGACTTGCGACATATATTCAAAAGCAAAAGCTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCAGGTTTTCTTTCTTAAATCATGACAAGCCTCATAAAATATCTACCGGAAATAATGGTTTCTCTTATTCATCATCTTCCGGATTCAGCAATGTGACCAAGTATGAGACGCCATACTCTACGGGAATTAATATGCATATATTTTTCCCTGCCACGGTTATGAAGTTAAATCACCGTCCTGGATTTCAGGCAGCTAATAGTTCTCCTGTTCCCTGGCTTGATGATTCAAAGCCTATTGATCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCTTGGATCAGCTCGGATAGAAAAGAATGTTGAGATGCTTGTGAATTTCAACAAACGATTTCATCTAATACGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCTTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTTTCCTATACGATTGATCACAAATTTGAAGTTGAACACTTCAACAAGATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCTAGTTTTGAAACAAATACATGGGAGCAGAGAATGCTGACGCATCATCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAGTCGTGAAGAAACTGAAATTTGGCATTTAATTAGAGAACTGTTCTCCAATAAGGAGCAAATAAAAATCATAGGATGCATGCTTGGAAGAATTAGAGCAGAAATTTTGCAAGATATGATACCCTGGTTAATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAATGGTGGGATGGGTACAGGATAGCAAAGGAGAAAGAGAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAACTACATGAAGAATCCACTTCCAACAAAAGCGAATTTTTTTCACAGAGGGATGATATTGGTGATAATAATGAGCAGTCCCACAATTGCAATCTTCATGGCAAATCTAAGGTTCGTAAAGCAAAACAGATTAGTAGTGAATGTTCAGAATGCAGGAATCAATTGAGTGATAAAAACAAACAAACATGCACTAAATTAACAGATATCACAAGTTCGATCAATGATAAAGGTCAGACTTTTCAATTGTGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAATCCAGATGATCTGGAGATGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATGTATAATTCAGAATCTGCTGATGAGCCGTTGGATTGTTAGACAGCATATCTCTTTTTCGGAAGGCACTGTCACAAACAATGGGCAGGAACTTCCTGGACAGTATCCGTCTTACAGGGACCCTCTCAAATTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTGGCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCAACAGATCATCTGATTGACAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAGCCAATCAGTGCCACATGTTCTACTGTGTCTTGTGGTAACTTAGCTATGGCAAAATACTACTGCAGGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGTCTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGGCTCGTTCCCTTACAGTACATATATGCAGAGAGAAATCATTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCATTCAACATGTTTCAAGGAGTATACCTACTTCAATTATACCTGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGACGCGTACTTGGCTGAAGAAAAAATCCCAGACGAGCATTTGGGTAAAACTCAGATGATTCTATGCAATGACTGTGAAAAGAAAGGAACAGTTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGCGGCTCCTACAACACCAGAGTTCTATGA 3459 0.3917 MHHHGYLPCIGCTCEKCDELMDPNENISKLFQELICCIGILQATTFQHMQKEEEQVFPLLMQKVSIDEQALLVWQFICSVPIMLLREILPWMVSFLSAEKQAEVRKFLNEITPMEKELQEVLIAWLGSNTQTFNQDCSMNEAVQRADGSQHMKRPRWLSCCNTNFKAVSNQMKANCSDIEDRANQVNILHLWHNAIKKDMKEMLEELHQIRNNTCFHNLDSLLIQLKFFADVLICYSNAQKKFFYPVLSELAYGWLTKSTEQFFGESHVEDLQQLLLCNAENSMPSSEFVEKLCRELGLFVARINKQFAFQETEVFPVIRLNCSNGTLEELISLSLHMMPLGLLKCAITWFAGHLSENESRSILNAIKQGNTFVHEAFASLVHEWFRVGYSGKTSIEKFRQDLRHIFKSKSSLLTEQVKEAPRFSFLNHDKPHKISTGNNGFSYSSSSGFSNVTKYETPYSTGINMHIFFPATVMKLNHRPGFQAANSSPVPWLDDSKPIDLIFFFHKAIKNDLDYLVLGSARIEKNVEMLVNFNKRFHLIRFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFNKISCILDKMFDLHFSVSSFETNTWEQRMLTHHQLCRKLQEMCKSMHKLLSDHMSREETEIWHLIRELFSNKEQIKIIGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRIAKEKERSNDPPLQTVEPLEIISKYLSKEVLNELHEESTSNKSEFFSQRDDIGDNNEQSHNCNLHGKSKVRKAKQISSECSECRNQLSDKNKQTCTKLTDITSSINDKGQTFQLCENSGHYDHLMKINPDDLEMAIRRVSRDSSLDLQKKSCIIQNLLMSRWIVRQHISFSEGTVTNNGQELPGQYPSYRDPLKLIYGCKHYKRSCKLLASCCNQLYTCIHCHNDATDHLIDRKSITKMMCMKCLKIQPISATCSTVSCGNLAMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMARSLTVHICREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFKEYTYFNYTCPICYKSLGDMQVYFRMLDAYLAEEKIPDEHLGKTQMILCNDCEKKGTVPFHWLYHKCSSCGSYNTRVL 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1592 1152 MobiDBLite consensus disorder prediction 759 774 - -
Prci9g1592 1152 ProSiteProfiles Zinc finger RING-type profile. 1046 1087 IPR001841 -
Prci9g1592 1152 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 543 1152 - -
Prci9g1592 1152 Pfam CHY zinc finger 917 992 IPR008913 GO:0008270
Prci9g1592 1152 FunFam Zinc finger protein-related isoform 1 1041 1090 - -
Prci9g1592 1152 SUPERFAMILY RING/U-box 1034 1092 - -
Prci9g1592 1152 Gene3D nmb1532 protein domain like 2 78 - -
Prci9g1592 1152 Gene3D nmb1532 protein domain like 181 335 - -
Prci9g1592 1152 Gene3D nmb1532 protein domain like 497 666 - -
Prci9g1592 1152 SUPERFAMILY Zinc hairpin stack 983 1037 IPR037275 -
Prci9g1592 1152 SUPERFAMILY CHY zinc finger-like 908 973 IPR037274 GO:0008270
Prci9g1592 1152 CDD RING-H2_Pirh2-like 1045 1088 - -
Prci9g1592 1152 SMART ring_2 1046 1087 IPR001841 -
Prci9g1592 1152 MobiDBLite consensus disorder prediction 759 781 - -
Prci9g1592 1152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1039 1089 IPR013083 -
Prci9g1592 1152 ProSiteProfiles Zinc finger CTCHY-type profile. 982 1045 IPR017921 -
Prci9g1592 1152 FunFam RING finger and CHY zinc finger domain-containing protein 1 1116 1152 - -
Prci9g1592 1152 Gene3D - 1117 1152 - -
Prci9g1592 1152 Pfam Zinc-ribbon 1093 1150 IPR039512 -
Prci9g1592 1152 CDD Hr-like 501 646 - -
Prci9g1592 1152 Pfam Ring finger domain 1044 1087 IPR001841 -
Prci9g1592 1152 Coils Coil 193 213 - -
Prci9g1592 1152 ProSiteProfiles Zinc finger CHY-type profile. 910 979 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1592 Prci-Chr9 28537224 28546421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1592 32 742 C2H2 Transcription Factor Family AT3G18290 30.026 9.67e-91 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1592 K16276 - gmx:100802706 1637.08