Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1589 ATGGATCCAAATGAGAATATTTCCAAGCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTTCAGCATATGCAGAAGGAAGAAGAACAGGTTTTTCCTCTCTTGATGCAGAAAGTTTCTATCGACGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTGCGGGAAATTTTGCCATGGATGGTATCCTTTCTTTCTGCAGAAAAACAAGCCGAAGTTCGGAAGTTTTTAAATGAAATTACACCAATGGAAAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTAGCAACACCCAAACCTTCAACCAGGACTGTTCTATGAATGAAGCTGTTCAACGTGCTGATGGATCCCAACATATGAAAAGACCGCGATGGTTGAGTTGTTGCAATACGAATTTTAAAGCCGTTTCAAATCAGATGAAAGCAAATTGCTCAGACATAGAAGATAGAGCCAATCAAGTTAATATTCTTCACCTTTGGCATAATGCCATTAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGGAACAACACCTGTTTTCATAATTTGGATTCATTACTCATCCAACTAAAATTCTTCGCTGATGTTCTCATCTGCTACAGTAATGCTCAGAAGAAATTCTTTTACCCGGTTTTGAGTGAACTTGCTTACGGCTGGTTGACCAAGTCTACTGAACAATTTTTCGGTGAAAGTCACGTTGAAGATTTACAGCAGTTGCTATTGTGTAATGCTGAGAACAGTATGCCTTCGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGGGCTATTTGTGGCACGAATCAACAAACAATTTGCTTTTCAAGAAACAGAGGTATTTCCTGTCATTCGATTGAACTGCAGCAACGGAACGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGCGATAACTTGGTTCGCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAATGCCATAAAACAAGGAAATACTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTTATTCAGGTAAAACTTCCATTGAAAAATTCCGACAAGACTTGCGACATATATTCAAAAGCAAAAGCTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCAGGTTTTCTTTCTTAAATCATGACAAGCCTCATAAAATATCTACCGGAAATAATGGTTTCTCTTATTCATCATCTTCCGGATTCAGCAATGTGACCAAGTATGAGACGCCATACTCTACGGGAATTAATATGCATATATTTTTCCCTGCCACGGTTATGAAGTTAAATCACCGTCCTGGATTTCAGGCAGCTAATAGTTCTCCTGTTCCCTGGCTTGATGATTCAAAGCCTATTGATCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCTTGGATCAGCTCGGATAGAAAAGAATGTTGAGATGCTTGTGAATTTCAACAAACGATTTCATCTAATACGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCTTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTTTCCTATACGATTGATCACAAATTTGAAGTTGAACACTTCAACAAGATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCTAGTTTTGAAACAAATACATGGGAGCAGAGAATGCTGACGCATCATCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAGTCGTGAAGAAACTGAAATTTGGCATTTAATTAGAGAACTGTTCTCCAATAAGGAGCAAATAAAAATCATAGGATGCATGCTTGGAAGAATTAGAGCAGAAATTTTGCAAGATATGATACCCTGGTTAATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAATGGTGGGATGGGTACAGGATAGCAAAGGAGAAAGAGAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAACTACATGAAGAATCCACTTCCAACAAAAGCGAATTTTTTTCACAGAGGGATGATATTGGTGATAATAATGAGCAGTCCCACAATTGCAATCTTCATGGCAAATCTAAGGTTCGTAAAGCAAAACAGATTAGTAGTGAATGTTCAGAATGCAGGAATCAATTGAGTGATAAAAACAAACAAACATGCACTAAATTAACAGATATCACAAGTTCGATCAATGATAAAGGTCAGACTTTTCAATTGTGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAATCCAGATGATCTGGAGATGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATGTATAATTCAGAATCTGCTGATGAGCCGTTGGATTGTTAGACAGCATATCTCTTTTTCGGAAGGCACTGTCACAAACAATGGGCAGGAACTTCCTGGACAGTATCCGTCTTACAGGGACCCTCTCAAATTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTGGCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCAACAGATCATCTGATTGACAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAGCCAATCAGTGCCACATGTTCTACTGTGTCTTGTGGTAACTTAGCTATGGCAAAATACTACTGCAGGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGTCTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGGCTCGTTCCCTTACAGTACATATATGCAGAGAGAAATCATTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCATTCAACATGTTTCAAGGAGTATACCTACTTCAATTATACCTGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGACGCGTACTTGGCTGAAGAAAAAATCCCAGACGAGCATTTGGGTAAAACTCAGATGATTCTATGCAATGACTGTGAAAAGAAAGGAACAGTTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGCGGCTCCTACAACACCAGAGTTCTATGA 3399 0.3916 MDPNENISKLFQELICCIGILQATTFQHMQKEEEQVFPLLMQKVSIDEQALLVWQFICSVPIMLLREILPWMVSFLSAEKQAEVRKFLNEITPMEKELQEVLIAWLGSNTQTFNQDCSMNEAVQRADGSQHMKRPRWLSCCNTNFKAVSNQMKANCSDIEDRANQVNILHLWHNAIKKDMKEMLEELHQIRNNTCFHNLDSLLIQLKFFADVLICYSNAQKKFFYPVLSELAYGWLTKSTEQFFGESHVEDLQQLLLCNAENSMPSSEFVEKLCRELGLFVARINKQFAFQETEVFPVIRLNCSNGTLEELISLSLHMMPLGLLKCAITWFAGHLSENESRSILNAIKQGNTFVHEAFASLVHEWFRVGYSGKTSIEKFRQDLRHIFKSKSSLLTEQVKEAPRFSFLNHDKPHKISTGNNGFSYSSSSGFSNVTKYETPYSTGINMHIFFPATVMKLNHRPGFQAANSSPVPWLDDSKPIDLIFFFHKAIKNDLDYLVLGSARIEKNVEMLVNFNKRFHLIRFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFNKISCILDKMFDLHFSVSSFETNTWEQRMLTHHQLCRKLQEMCKSMHKLLSDHMSREETEIWHLIRELFSNKEQIKIIGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRIAKEKERSNDPPLQTVEPLEIISKYLSKEVLNELHEESTSNKSEFFSQRDDIGDNNEQSHNCNLHGKSKVRKAKQISSECSECRNQLSDKNKQTCTKLTDITSSINDKGQTFQLCENSGHYDHLMKINPDDLEMAIRRVSRDSSLDLQKKSCIIQNLLMSRWIVRQHISFSEGTVTNNGQELPGQYPSYRDPLKLIYGCKHYKRSCKLLASCCNQLYTCIHCHNDATDHLIDRKSITKMMCMKCLKIQPISATCSTVSCGNLAMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMARSLTVHICREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFKEYTYFNYTCPICYKSLGDMQVYFRMLDAYLAEEKIPDEHLGKTQMILCNDCEKKGTVPFHWLYHKCSSCGSYNTRVL 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1589 1132 ProSiteProfiles Zinc finger CHY-type profile. 890 959 IPR008913 GO:0008270
Prci9g1589 1132 ProSiteProfiles Zinc finger CTCHY-type profile. 962 1025 IPR017921 -
Prci9g1589 1132 Gene3D nmb1532 protein domain like 477 646 - -
Prci9g1589 1132 Gene3D nmb1532 protein domain like 2 58 - -
Prci9g1589 1132 Gene3D nmb1532 protein domain like 161 315 - -
Prci9g1589 1132 Gene3D - 1097 1132 - -
Prci9g1589 1132 FunFam Zinc finger protein-related isoform 1 1021 1070 - -
Prci9g1589 1132 MobiDBLite consensus disorder prediction 739 754 - -
Prci9g1589 1132 CDD RING-H2_Pirh2-like 1025 1068 - -
Prci9g1589 1132 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 523 1132 - -
Prci9g1589 1132 MobiDBLite consensus disorder prediction 739 761 - -
Prci9g1589 1132 Pfam Ring finger domain 1024 1067 IPR001841 -
Prci9g1589 1132 SUPERFAMILY RING/U-box 1014 1072 - -
Prci9g1589 1132 Pfam CHY zinc finger 897 972 IPR008913 GO:0008270
Prci9g1589 1132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1019 1069 IPR013083 -
Prci9g1589 1132 SUPERFAMILY CHY zinc finger-like 888 953 IPR037274 GO:0008270
Prci9g1589 1132 Pfam Zinc-ribbon 1073 1130 IPR039512 -
Prci9g1589 1132 SUPERFAMILY Zinc hairpin stack 963 1017 IPR037275 -
Prci9g1589 1132 SMART ring_2 1026 1067 IPR001841 -
Prci9g1589 1132 Coils Coil 173 193 - -
Prci9g1589 1132 CDD Hr-like 481 626 - -
Prci9g1589 1132 ProSiteProfiles Zinc finger RING-type profile. 1026 1067 IPR001841 -
Prci9g1589 1132 FunFam RING finger and CHY zinc finger domain-containing protein 1 1096 1132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1589 Prci-Chr9 28537224 28550152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1589 12 722 C2H2 Transcription Factor Family AT3G18290 30.026 9.97e-91 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1589 K16276 - gmx:100802706 1630.92