Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci9g1588 | ATGGACCTACTTGGGCCGGATAAGCAGGAGAATATTGTACATGACGCGTCCGATTGCGTCTCCCGAGTTCCACTCGTCGATGCCCCTATACTCTTGTTTGTTTGCTTCCACAAGGCTCTGCGTGCGGAACTCAACGAGCTTCGGGGCTTGGCGGAAACGTCATCGTTGGAGACTGCGTCGCACAGCCCAAAGCCAATTCTTATACTTCAACGAAGATTCGAGTTTCTCAAACTAGTTCTCAAGTATCATTGCGTTGCGGAAGACGAGGTTATCTTCCCTGCATTGGATGTACCTGTGAAAAATGTGGTATGTACTTATTCCCTTGAACATAATTGCATCGATGAAGTCTTCAGCTCAATCTTTCACTATTTAGATGAGTTGATGGATCCAAATGAGAATATTTCCAAGCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTTCAGCATATGCAGAAGGAAGAAGAACAGGTTTTTCCTCTCTTGATGCAGAAAGTTTCTATCGACGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTGCGGGAAATTTTGCCATGGATGGTATCCTTTCTTTCTGCAGAAAAACAAGCCGAAGTTCGGAAGTTTTTAAATGAAATTACACCAATGGAAAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTAGCAACACCCAAACCTTCAACCAGGACTGTTCTATGAATGAAGCTGTTCAACGTGCTGATGGATCCCAACATATGAAAAGACCGCGATGGTTGAGTTGTTGCAATACGAATTTTAAAGCCGTTTCAAATCAGATGAAAGCAAATTGCTCAGACATAGAAGATAGAGCCAATCAAGTTAATATTCTTCACCTTTGGCATAATGCCATTAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGGAACAACACCTGTTTTCATAATTTGGATTCATTACTCATCCAACTAAAATTCTTCGCTGATGTTCTCATCTGCTACAGTAATGCTCAGAAGAAATTCTTTTACCCGGTTTTGAGTGAACTTGCTTACGGCTGGTTGACCAAGTCTACTGAACAATTTTTCGGTGAAAGTCACGTTGAAGATTTACAGCAGTTGCTATTGTGTAATGCTGAGAACAGTATGCCTTCGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGGGCTATTTGTGGCACGAATCAACAAACAATTTGCTTTTCAAGAAACAGAGGTATTTCCTGTCATTCGATTGAACTGCAGCAACGGAACGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGCGATAACTTGGTTCGCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAATGCCATAAAACAAGGAAATACTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTTATTCAGGTAAAACTTCCATTGAAAAATTCCGACAAGACTTGCGACATATATTCAAAAGCAAAAGCTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCAGGTTTTCTTTCTTAAATCATGACAAGCCTCATAAAATATCTACCGGAAATAATGGTTTCTCTTATTCATCATCTTCCGGATTCAGCAATGTGACCAAGTATGAGACGCCATACTCTACGGGAATTAATATGCATATATTTTTCCCTGCCACGGTTATGAAGTTAAATCACCGTCCTGGATTTCAGGCAGCTAATAGTTCTCCTGTTCCCTGGCTTGATGATTCAAAGCCTATTGATCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCTTGGATCAGCTCGGATAGAAAAGAATGTTGAGATGCTTGTGAATTTCAACAAACGATTTCATCTAATACGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCTTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTTTCCTATACGATTGATCACAAATTTGAAGTTGAACACTTCAACAAGATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCTAGTTTTGAAACAAATACATGGGAGCAGAGAATGCTGACGCATCATCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAGTCGTGAAGAAACTGAAATTTGGCATTTAATTAGAGAACTGTTCTCCAATAAGGAGCAAATAAAAATCATAGGATGCATGCTTGGAAGAATTAGAGCAGAAATTTTGCAAGATATGATACCCTGGTTAATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAATGGTGGGATGGGTACAGGATAGCAAAGGAGAAAGAGAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAACTACATGAAGAATCCACTTCCAACAAAAGCGAATTTTTTTCACAGAGGGATGATATTGGTGATAATAATGAGCAGTCCCACAATTGCAATCTTCATGGCAAATCTAAGGTTCGTAAAGCAAAACAGATTAGTAGTGAATGTTCAGAATGCAGGAATCAATTGAGTGATAAAAACAAACAAACATGCACTAAATTAACAGATATCACAAGTTCGATCAATGATAAAGGTCAGACTTTTCAATTGTGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAATCCAGATGATCTGGAGATGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATGTATAATTCAGAATCTGCTGATGAGCCGTTGGATTGTTAGACAGCATATCTCTTTTTCGGAAGGCACTGTCACAAACAATGGGCAGGAACTTCCTGGACAGTATCCGTCTTACAGGGACCCTCTCAAATTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTGGCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCAACAGATCATCTGATTGACAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAGCCAATCAGTGCCACATGTTCTACTGTGTCTTGTGGTAACTTAGCTATGGCAAAATACTACTGCAGGATCTGTAGATTGTTTGATGATGAAAGGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGAAAGGGCTTGGGTCTAGACTACTTTCATTGTATGAATTGCAATGCTTGTATGGCTCGTTCCCTTACAGTACATATATGCAGAGAGAAATCATTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCATTCAACATGTTTCAAGGAGTATACCTACTTCAATTATACCTGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGACGCGTACTTGGCTGAAGAAAAAATCCCAGACGAGCATTTGGGTAAAACTCAGATGATTCTATGCAATGACTGTGAAAAGAAAGGAACAGTTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGCGGCTCCTACAACACCAGAGTTCTATGA | 3780 | 0.3992 | MDLLGPDKQENIVHDASDCVSRVPLVDAPILLFVCFHKALRAELNELRGLAETSSLETASHSPKPILILQRRFEFLKLVLKYHCVAEDEVIFPALDVPVKNVVCTYSLEHNCIDEVFSSIFHYLDELMDPNENISKLFQELICCIGILQATTFQHMQKEEEQVFPLLMQKVSIDEQALLVWQFICSVPIMLLREILPWMVSFLSAEKQAEVRKFLNEITPMEKELQEVLIAWLGSNTQTFNQDCSMNEAVQRADGSQHMKRPRWLSCCNTNFKAVSNQMKANCSDIEDRANQVNILHLWHNAIKKDMKEMLEELHQIRNNTCFHNLDSLLIQLKFFADVLICYSNAQKKFFYPVLSELAYGWLTKSTEQFFGESHVEDLQQLLLCNAENSMPSSEFVEKLCRELGLFVARINKQFAFQETEVFPVIRLNCSNGTLEELISLSLHMMPLGLLKCAITWFAGHLSENESRSILNAIKQGNTFVHEAFASLVHEWFRVGYSGKTSIEKFRQDLRHIFKSKSSLLTEQVKEAPRFSFLNHDKPHKISTGNNGFSYSSSSGFSNVTKYETPYSTGINMHIFFPATVMKLNHRPGFQAANSSPVPWLDDSKPIDLIFFFHKAIKNDLDYLVLGSARIEKNVEMLVNFNKRFHLIRFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFNKISCILDKMFDLHFSVSSFETNTWEQRMLTHHQLCRKLQEMCKSMHKLLSDHMSREETEIWHLIRELFSNKEQIKIIGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRIAKEKERSNDPPLQTVEPLEIISKYLSKEVLNELHEESTSNKSEFFSQRDDIGDNNEQSHNCNLHGKSKVRKAKQISSECSECRNQLSDKNKQTCTKLTDITSSINDKGQTFQLCENSGHYDHLMKINPDDLEMAIRRVSRDSSLDLQKKSCIIQNLLMSRWIVRQHISFSEGTVTNNGQELPGQYPSYRDPLKLIYGCKHYKRSCKLLASCCNQLYTCIHCHNDATDHLIDRKSITKMMCMKCLKIQPISATCSTVSCGNLAMAKYYCRICRLFDDEREIYHCPYCNLCRVGKGLGLDYFHCMNCNACMARSLTVHICREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFKEYTYFNYTCPICYKSLGDMQVYFRMLDAYLAEEKIPDEHLGKTQMILCNDCEKKGTVPFHWLYHKCSSCGSYNTRVL | 1259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci9g1588 | 1259 | CDD | Hr-like | 36 | 165 | - | - | |
Prci9g1588 | 1259 | ProSiteProfiles | Zinc finger CHY-type profile. | 1017 | 1086 | IPR008913 | GO:0008270 | |
Prci9g1588 | 1259 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1089 | 1152 | IPR017921 | - | |
Prci9g1588 | 1259 | Pfam | CHY zinc finger | 1024 | 1099 | IPR008913 | GO:0008270 | |
Prci9g1588 | 1259 | CDD | RING-H2_Pirh2-like | 1152 | 1195 | - | - | |
Prci9g1588 | 1259 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1146 | 1196 | IPR013083 | - | |
Prci9g1588 | 1259 | SMART | ring_2 | 1153 | 1194 | IPR001841 | - | |
Prci9g1588 | 1259 | Gene3D | - | 1224 | 1259 | - | - | |
Prci9g1588 | 1259 | MobiDBLite | consensus disorder prediction | 866 | 888 | - | - | |
Prci9g1588 | 1259 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 650 | 1259 | - | - | |
Prci9g1588 | 1259 | ProSiteProfiles | Zinc finger RING-type profile. | 1153 | 1194 | IPR001841 | - | |
Prci9g1588 | 1259 | FunFam | RING finger and CHY zinc finger domain-containing protein 1 | 1223 | 1259 | - | - | |
Prci9g1588 | 1259 | Coils | Coil | 300 | 320 | - | - | |
Prci9g1588 | 1259 | MobiDBLite | consensus disorder prediction | 866 | 881 | - | - | |
Prci9g1588 | 1259 | SUPERFAMILY | RING/U-box | 1141 | 1199 | - | - | |
Prci9g1588 | 1259 | Pfam | Zinc-ribbon | 1200 | 1257 | IPR039512 | - | |
Prci9g1588 | 1259 | Pfam | Hemerythrin HHE cation binding domain | 37 | 167 | IPR012312 | - | |
Prci9g1588 | 1259 | SUPERFAMILY | Zinc hairpin stack | 1090 | 1144 | IPR037275 | - | |
Prci9g1588 | 1259 | FunFam | Zinc finger protein-related isoform 1 | 1148 | 1197 | - | - | |
Prci9g1588 | 1259 | Pfam | Ring finger domain | 1151 | 1194 | IPR001841 | - | |
Prci9g1588 | 1259 | Gene3D | nmb1532 protein domain like | 288 | 442 | - | - | |
Prci9g1588 | 1259 | Gene3D | nmb1532 protein domain like | 28 | 185 | - | - | |
Prci9g1588 | 1259 | Gene3D | nmb1532 protein domain like | 604 | 773 | - | - | |
Prci9g1588 | 1259 | CDD | Hr-like | 608 | 753 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci9g1588 | Prci-Chr9 | 28537224 | 28550460 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci9g1588 | 28 | 849 | C2H2 Transcription Factor Family | AT3G18290 | 31.567 | 1.61e-116 | 392 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci9g1588 | K16276 | - | gmx:100802706 | 1770.75 |