Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1587 ATGGACCTACTTGGGCCGGATAAGCAGGAGAATATTGTACATGACGCGTCCGATTGCGTCTCCCGAGTTCCACTCGTCGATGCCCCTATACTCTTGTTTGTTTGCTTCCACAAGGCTCTGCGTGCGGAACTCAACGAGCTTCGGGGCTTGGCGGAAACGTCATCGTTGGAGACTGCGTCGCACAGCCCAAAGCCAATTCTTATACTTCAACGAAGATTCGAGTTTCTCAAACTAGTTCTCAAGTATCATTGCGTTGCGGAAGACGAGGTTATCTTCCCTGCATTGGATGTACCTGTGAAAAATGTGGTATGTACTTATTCCCTTGAACATAATTGCATCGATGAAGTCTTCAGCTCAATCTTTCACTATTTAGATGAGTTGATGGATCCAAATGAGAATATTTCCAAGCTGTTTCAAGAACTTATATGCTGCATTGGAATCTTGCAAGCCACCACATTTCAGCATATGCAGAAGGAAGAAGAACAGGTTTTTCCTCTCTTGATGCAGAAAGTTTCTATCGACGAACAGGCTTTGCTGGTCTGGCAATTCATATGCAGTGTTCCTATAATGTTGCTGCGGGAAATTTTGCCATGGATGGTATCCTTTCTTTCTGCAGAAAAACAAGCCGAAGTTCGGAAGTTTTTAAATGAAATTACACCAATGGAAAAAGAACTGCAAGAGGTTTTGATTGCTTGGCTTGGTAGCAACACCCAAACCTTCAACCAGGACTGTTCTATGAATGAAGCTGTTCAACGTGCTGATGGATCCCAACATATGAAAAGACCGCGATGGTTGAGTTGTTGCAATACGAATTTTAAAGCCGTTTCAAATCAGATGAAAGCAAATTGCTCAGACATAGAAGATAGAGCCAATCAAGTTAATATTCTTCACCTTTGGCATAATGCCATTAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGGAACAACACCTGTTTTCATAATTTGGATTCATTACTCATCCAACTAAAATTCTTCGCTGATGTTCTCATCTGCTACAGTAATGCTCAGAAGAAATTCTTTTACCCGGTTTTGAGTGAACTTGCTTACGGCTGGTTGACCAAGTCTACTGAACAATTTTTCGGTGAAAGTCACGTTGAAGATTTACAGCAGTTGCTATTGTGTAATGCTGAGAACAGTATGCCTTCGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGGGCTATTTGTGGCACGAATCAACAAACAATTTGCTTTTCAAGAAACAGAGGTATTTCCTGTCATTCGATTGAACTGCAGCAACGGAACGCTAGAGGAACTCATTAGCTTGAGCCTGCACATGATGCCACTTGGGTTGCTGAAGTGCGCGATAACTTGGTTCGCAGGTCACTTGTCTGAAAATGAATCTAGGTCCATTCTCAATGCCATAAAACAAGGAAATACTTTTGTCCATGAAGCTTTTGCATCACTGGTACATGAGTGGTTCCGTGTTGGTTATTCAGGTAAAACTTCCATTGAAAAATTCCGACAAGACTTGCGACATATATTCAAAAGCAAAAGCTCTTTGTTAACTGAGCAAGTCAAGGAAGCTCCCAGGTTTTCTTTCTTAAATCATGACAAGCCTCATAAAATATCTACCGGAAATAATGGTTTCTCTTATTCATCATCTTCCGGATTCAGCAATGTGACCAAGTATGAGACGCCATACTCTACGGGAATTAATATGCATATATTTTTCCCTGCCACGGTTATGAAGTTAAATCACCGTCCTGGATTTCAGGCAGCTAATAGTTCTCCTGTTCCCTGGCTTGATGATTCAAAGCCTATTGATCTTATATTTTTCTTTCACAAGGCTATCAAGAATGATTTGGATTACCTTGTTCTTGGATCAGCTCGGATAGAAAAGAATGTTGAGATGCTTGTGAATTTCAACAAACGATTTCATCTAATACGCTTTCTTCATCGAATCCATAGTGAGACAGAGGATGAGATAGCATTCCCAGCTTTAGAGGCAATGAGTAAAGTGAAAAACATTAGCCTTTCCTATACGATTGATCACAAATTTGAAGTTGAACACTTCAACAAGATATCCTGTATCCTTGATAAGATGTTCGATCTACATTTTTCAGTTTCTAGTTTTGAAACAAATACATGGGAGCAGAGAATGCTGACGCATCATCAACTGTGCAGAAAGCTGCAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAGTCGTGAAGAAACTGAAATTTGGCATTTAATTAGAGAACTGTTCTCCAATAAGGAGCAAATAAAAATCATAGGATGCATGCTTGGAAGAATTAGAGCAGAAATTTTGCAAGATATGATACCCTGGTTAATGACATCTTTAACCCCAGAGGAACAGCATGTTTTAATGTTCTTATGGTCCATGATTGCCAAAAATACAATGTTTGATGAATGGCTAGCTGAATGGTGGGATGGGTACAGGATAGCAAAGGAGAAAGAGAGATCAAATGATCCTCCTCTGCAGACTGTTGAGCCGTTGGAGATCATATCTAAATATTTATCTAAAGAAGTTCTCAATGAACTACATGAAGAATCCACTTCCAACAAAAGCGAATTTTTTTCACAGAGGGATGATATTGGTGATAATAATGAGCAGTCCCACAATTGCAATCTTCATGGCAAATCTAAGGTTCGTAAAGCAAAACAGATTAGTAGTGAATGTTCAGAATGCAGGAATCAATTGAGTGATAAAAACAAACAAACATGCACTAAATTAACAGATATCACAAGTTCGATCAATGATAAAGGTCAGACTTTTCAATTGTGTGAAAACTCTGGGCACTATGACCATCTTATGAAAATAAATCCAGATGATCTGGAGATGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCTGCAGAAGAAGTCATGTATAATTCAGAATCTGCTGATGAGCCGTTGGATTGTTAGACAGCATATCTCTTTTTCGGAAGGCACTGTCACAAACAATGGGCAGGAACTTCCTGGACAGTATCCGTCTTACAGGGACCCTCTCAAATTAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTGGCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATGATGCAACAGATCATCTGATTGACAGGAAATCCATTACAAAGATGATGTGCATGAAGTGCTTGAAGATTCAGCCAATCAGTGCCACATGTTCTACTGTGTCTTGTGGTAACTTAGCTATGGCAAAATACTACTGCAGGATCTGTAGATTGTTTGATGATGAAAGAGAGAAATCATTAGAGGACAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTGCTCTCCAGTAAAGGCCCTTCCATGTGGTCATGTCATGCATTCAACATGTTTCAAGGAGTATACCTACTTCAATTATACCTGTCCAATATGTTACAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGACGCGTACTTGGCTGAAGAAAAAATCCCAGACGAGCATTTGGGTAAAACTCAGATGATTCTATGCAATGACTGTGAAAAGAAAGGAACAGTTCCCTTCCACTGGCTTTACCACAAATGTTCTTCTTGCGGCTCCTACAACACCAGAGTTCTATGA 3657 0.3981 MDLLGPDKQENIVHDASDCVSRVPLVDAPILLFVCFHKALRAELNELRGLAETSSLETASHSPKPILILQRRFEFLKLVLKYHCVAEDEVIFPALDVPVKNVVCTYSLEHNCIDEVFSSIFHYLDELMDPNENISKLFQELICCIGILQATTFQHMQKEEEQVFPLLMQKVSIDEQALLVWQFICSVPIMLLREILPWMVSFLSAEKQAEVRKFLNEITPMEKELQEVLIAWLGSNTQTFNQDCSMNEAVQRADGSQHMKRPRWLSCCNTNFKAVSNQMKANCSDIEDRANQVNILHLWHNAIKKDMKEMLEELHQIRNNTCFHNLDSLLIQLKFFADVLICYSNAQKKFFYPVLSELAYGWLTKSTEQFFGESHVEDLQQLLLCNAENSMPSSEFVEKLCRELGLFVARINKQFAFQETEVFPVIRLNCSNGTLEELISLSLHMMPLGLLKCAITWFAGHLSENESRSILNAIKQGNTFVHEAFASLVHEWFRVGYSGKTSIEKFRQDLRHIFKSKSSLLTEQVKEAPRFSFLNHDKPHKISTGNNGFSYSSSSGFSNVTKYETPYSTGINMHIFFPATVMKLNHRPGFQAANSSPVPWLDDSKPIDLIFFFHKAIKNDLDYLVLGSARIEKNVEMLVNFNKRFHLIRFLHRIHSETEDEIAFPALEAMSKVKNISLSYTIDHKFEVEHFNKISCILDKMFDLHFSVSSFETNTWEQRMLTHHQLCRKLQEMCKSMHKLLSDHMSREETEIWHLIRELFSNKEQIKIIGCMLGRIRAEILQDMIPWLMTSLTPEEQHVLMFLWSMIAKNTMFDEWLAEWWDGYRIAKEKERSNDPPLQTVEPLEIISKYLSKEVLNELHEESTSNKSEFFSQRDDIGDNNEQSHNCNLHGKSKVRKAKQISSECSECRNQLSDKNKQTCTKLTDITSSINDKGQTFQLCENSGHYDHLMKINPDDLEMAIRRVSRDSSLDLQKKSCIIQNLLMSRWIVRQHISFSEGTVTNNGQELPGQYPSYRDPLKLIYGCKHYKRSCKLLASCCNQLYTCIHCHNDATDHLIDRKSITKMMCMKCLKIQPISATCSTVSCGNLAMAKYYCRICRLFDDEREKSLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFKEYTYFNYTCPICYKSLGDMQVYFRMLDAYLAEEKIPDEHLGKTQMILCNDCEKKGTVPFHWLYHKCSSCGSYNTRVL 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1587 1218 CDD Hr-like 36 165 - -
Prci9g1587 1218 Pfam Hemerythrin HHE cation binding domain 37 167 IPR012312 -
Prci9g1587 1218 ProSiteProfiles Zinc finger CHY-type profile. 1017 1086 IPR008913 GO:0008270
Prci9g1587 1218 SUPERFAMILY CHY zinc finger-like 1015 1080 IPR037274 GO:0008270
Prci9g1587 1218 MobiDBLite consensus disorder prediction 866 888 - -
Prci9g1587 1218 Pfam Zinc-ribbon 1159 1216 IPR039512 -
Prci9g1587 1218 Coils Coil 300 320 - -
Prci9g1587 1218 MobiDBLite consensus disorder prediction 866 881 - -
Prci9g1587 1218 Gene3D nmb1532 protein domain like 28 185 - -
Prci9g1587 1218 Gene3D nmb1532 protein domain like 604 773 - -
Prci9g1587 1218 Gene3D nmb1532 protein domain like 288 442 - -
Prci9g1587 1218 Pfam Ring finger domain 1110 1153 IPR001841 -
Prci9g1587 1218 FunFam RING finger and CHY zinc finger domain-containing protein 1 1182 1218 - -
Prci9g1587 1218 SUPERFAMILY RING/U-box 1111 1161 - -
Prci9g1587 1218 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1104 1218 - -
Prci9g1587 1218 SMART ring_2 1112 1153 IPR001841 -
Prci9g1587 1218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1105 1155 IPR013083 -
Prci9g1587 1218 ProSiteProfiles Zinc finger RING-type profile. 1112 1153 IPR001841 -
Prci9g1587 1218 CDD RING-H2_Pirh2-like 1111 1154 - -
Prci9g1587 1218 Gene3D - 1183 1218 - -
Prci9g1587 1218 FunFam Zinc finger protein-related isoform 1 1107 1156 - -
Prci9g1587 1218 Pfam CHY zinc finger 1024 1099 IPR008913 GO:0008270
Prci9g1587 1218 CDD Hr-like 608 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1587 Prci-Chr9 28537224 28550462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1587 28 849 C2H2 Transcription Factor Family AT3G18290 31.567 1.72e-116 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1587 K16276 - gmx:100802706 1663.66