Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1586 ATGGGACATAAAAAGCGAAACCCTGCCCCGCGTTCCAAACAATCGGCGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCCAATGGCCCTGCCTCAGCCGAGTCCGAGTTGTGCAGGAGTTCTAATCACACTATTCAAAGCGCGAGTAAGATCGAGCTGCCTCCTCACCCCGAGCCGTCGGCCTACTCCACTATCAAGCTTGAATGTGAACGAGCCCTCAATGCGCTCAGGCGTGGCAACCACACAAAGGCACTGAGGCTTATGAAGGAGTTATGCTCCAGACACGAGAGCTCCGCTTACTCGGCCTTGATTCACCGAGTTCAAGGTACCATCTGTGTCAAAGTGGCCTCAATTATTGATGATCCAAGTGCGAAGCAAAGACATTTGAAGCATGCTATTGAGTCTGCCCGAAAAGCCGCGGAGCAATCGCCCAGTTCTATTGAGTTCGCACATTTTTATGCAAATTTGTTATACGAGGCAGCGAATGATTCGACTGAATACGAGCAGGTGGTGAAGGAGTGTGAAAAAGCACTCGGGATTTCAAATCCAATTGATCCTGCGAAGGAGAGCTTGCAGGACGAGAGCCAGCAGAAAATATCAACTGCAGACGCCCGGATAGTACATGTTCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTGTCAACGTGGATGAAGAATCTTGGTAATGGGGAGGAGAAATTCCGTTTGATTCCGATAAGGAGGGCTACAGAGGACCCAATGGAGGTGAGGTTAGTTCAAGCTAGAAGGCCAAATGAGATAAAAAAGGTGACCAAGACACCTGAGGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTGCTGCAGCAAAAGTCAGAGTCACCCCAATCCCAGAACGAAGGGGACAGGGATGACAGGACATTGGATTCATCTTCAGGGTCTGGGCAGAGGATAAGTGAGAGGCGGAAGTATGGACATGTCCGAAAAGCTGGCTCTACATCTGAAAGGAGAGATTGGGTACGTTTATATTGGAATTCGATGAGTATTGATTTGAAGAAGGAGTTTCTTAGGATTAGGATATGTGATCTCAAATCTCACTTTGGCTCTTCAAAGGATACTTTGCTGAATGACATAGTAGCAGAAGCTTTGTCGTATGCTGAGGCTAACAAAACGTGGAAATTCTGGCTTTGCTGCCGCTGTAGTGAGAAGTTTTCAGATTCAGAATCTCACATGCAGCATGTTGTGCAGGAACACCTGGGGAATCTCTTACCTAAAATGCAGAGACTTTTACCTCAAAATGTAGACAATGAATGGATTGAGATGATTCTTAGCTGTTCTTGGAAAGCTCTGGATGCCTCTGCTGCAGTCAAAATGCTTGAAAATCAAGCAAAATGCAAAGATTTTTCGTTTCCTGAGGATACCTATATTGATCATACTGAGGAGCACCATTATTGCTTTAAAGACGCTAATAATTCTTTACCTGAAAGGGGACATAGCCTTGCTACCTGTGCACCAAATATAAGTAATCATTGTAAATCTGAGGAAACTAATATTACAGAAGGTGTTGAAGTTGAACGGTCTGTAGTATATTCCCTTGCAGATGGTTGGCCATTGTCAGATGACTCTGAGCGTGCAAAACTTCTTGAGAAAATTCGTGCAGTTTTTGATATGCTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTAGCAAGGTCATACAATTTGCCATGGATGAGATTCATGGACTTGCTGCTGGGTCTCAGCTTCTAAACCATGGTTTAGACCAGTCACCAACGTGCATATGCTTTTTAGGAGCCCATCAACTTAAGAAAATTCTCAAATTTTTGCAGGAACTATCACATACTTGTGGTTTGGGTAGATATGCTGATAAAAGTACTAGTCCCATGGATGATTTACACAATTCAAATCAAATTCCTGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTAGATGAATGTTTAGTGCCTGCAGAAATCACTCCAGGTGCTACTAAGAGTGCTGCATTGGATGATGTAATTACCCCAACTTCTAATGACGTAGTTTTACATAACACCGGTCCTTTCCTATCTTGGATATTTTCAGGTTCATCTTGTGGAGATCAATTGACCTCATGGATGAGAACAAAAGAAGATAAAAGAAATCAAGGAATGGAACTTCTCCAGACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTCTCTGAGAAGAAATGTGAGCGCTTGAATTATGAGGAAGCACTGCAGGTAGTAGAGGACCTTTGTCTAGAAGAAGGTAAGAAGAGGGAAAATTTCACTGAATTTGTTCAGCAAAACTATGGATCTGTTCTCAGAAACCGGAGAGAAGAGCTCATTGAGAGTGAGAATGATGTCATGTATGTTAGCAATAGATTTGAGTTGGATGCTATAACAAATGTACTGCAAGAAGCAGAGGCAATGAATGTTAATCAATTTGGTTATGGGGAAAATTATACTGGTGGATGTGACGTGGAATCAGGTGAAGATGATGAATGGAGAACAAAACAAATGGATAGCTACATAGAAATAGCCATTCAGAAACTGAAGGAAAACCTATCTGTGGAGCTTAGCAAAATTGATGGACGGATCATGAGAAATGTTACAGAGATGCAGCAGTTGGAGCTCAAGCTTGAGCCTGTTTCTGCTTTTGATTATCGTGCAATATTACTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTGGAAGATTTGGCTGAGAAGGATGCGACGGAGAAGTCTGATGCTGCAAGGGAAGCATTTTTGGCCGAGCTTGCTCTTGATTCAAAGAAGGGTGTCAAGGGGGGAAGTGATGGTGCAAAACATATGGAGAAAACGAAAGATAAGAAAAAAAATAAAGAGAACAGGAAAACAAGGGATTTGAAGGCTACATATGGTCATGAGCAGCTCATTCTGGACACTGCTACTCCCGATTCTTATTCTGCTGCGCCTGATAATGACCATGATTCCATTCTTGTTTCTACAATTAGTGCTGACTTGGAACAACTGGAAGAGGAAGTGAGACGTAAAATTGAGTTAGAAGAAGAGGAAAAAAAACTTGAAGAAACTTTGGAGTTACAACGACGAATAGAAAATGAGGCTAAACTGAAGCACCTCGCTGAGCAGCAAAAGAAATCTTCTGTGACGTATTTGGAGAAGTCAGCTGACAAATTTCTGGATTGTCAGTTAAGGGCTGTTGCTGATGGTCCAGAAGTTCATGAACATATGAGACCGCCTATGCTGGAGCAGTTGCCAAATATTAATGGTTACCCTAGCAATTCAGATGGTGTGCATATTGCCACATCAAATGGTTCTGCGGTACCAGACATATCTTTACTCGATTCAGTTAATCAAACTATTCATCATAAGCATCCAACAAATATCAAACAAGCAGATCTGTCTTGCAAAATAGCTCCTGAAAATGATTTTCAGCTGGCTGAGCAGCGGACAGGTAAAAAGGGTAAACGGCATAAAAATTCTTCCAGATTGGTTGTTGGAAAGTTTGAGGCTGTCTCATTGGATAAAGAGAACACTGATGCATATACCGACAATCAGTCAAGAGAGCAGGTTAAATTCCACAACAATCAGGATGCTAACAACGTGCAAGGAGACAATGGCTTAATGACTCTGAAAGAGTTACAAGTGGAGCATGATGAGGAGGAAAGGTTCCAAGCTGACCTAAAAAAAGCTGTGCGCCAAAGTCTGGACACATATCAAGCTCTTCAAAATTTGCCTCCAGTTTCTAGATTGGGAATGCCAGATAAAGCTGCTTTGCAAGTCAATAATTTTGGTGCTCCACTGGAGGAAAACACTACTGAGAATGTCAATGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTGGGTGAATATAATTGCTTTCTCAATGTTATAATACAATCTTTGTGGCATTTGCGACTTTTTCGCAAGGAATTTCTTAGAAGACCAAGATCAGAGCATGATCATGTGGGTAATCCTTGTGTTGTCTGTGCCTTGTATGAAATCTTCACTGCCATGGAAATTGCATCAAAGGATTTTAGGGGAGAAGCTGTAGCCCCTACTTCTCTGAGAATAGCTCTAAGCAACCTATGTCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTCCTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCATGATTCAAGTGTTTCTGAGACAGAATCAGTGGAAAGCAATTCCATGAGGTCTTGGGATTGTGCAAACAGTAGTTGCATAGCACATTCACTCTTTGGAATGGACATTTTTGAACGAATGAACTGCCAACATTGTGGTCTCGAGTCCAGGCATATGAAGTACACTTCCTTCTTCCACAATATAAATGCCAACTCCCTTCGGACCATGAAGCTCATGTGTAGCGAAAGCTCCTTTGATGATATCTTGAATCTAGTGGAGATGAATCATCAGTTAGCTTGTGATCCGGAAGCTGGCGGCTGTGGCAAGCTAAATTACATCCATCACTTTCTTTCAAAACCACCTTATGTTTTCACGACTGTTCTAGGTTGGCAAAAGACATGTGAGAGTGCTGATGATATTAAAGCAACTTTGGCAACACTGAGCACTGACATGGACATTAGTGTTCTTTATCGTGGATTAGATCCAAAAAGCATTCATAGCTTGGTTTCAGTGGTATGCTACTATGGGCAACATTATCATTGCTTTGCTTATAGCCATGAACATGAACAATGGATTATGTATGATGACAAGACAGTCAAGGTAATTGGTGGGTGGCTTGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4914 0.4243 MGHKKRNPAPRSKQSAAASPVTQSAIGGAANGPASAESELCRSSNHTIQSASKIELPPHPEPSAYSTIKLECERALNALRRGNHTKALRLMKELCSRHESSAYSALIHRVQGTICVKVASIIDDPSAKQRHLKHAIESARKAAEQSPSSIEFAHFYANLLYEAANDSTEYEQVVKECEKALGISNPIDPAKESLQDESQQKISTADARIVHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRATEDPMEVRLVQARRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSQNEGDRDDRTLDSSSGSGQRISERRKYGHVRKAGSTSERRDWVRLYWNSMSIDLKKEFLRIRICDLKSHFGSSKDTLLNDIVAEALSYAEANKTWKFWLCCRCSEKFSDSESHMQHVVQEHLGNLLPKMQRLLPQNVDNEWIEMILSCSWKALDASAAVKMLENQAKCKDFSFPEDTYIDHTEEHHYCFKDANNSLPERGHSLATCAPNISNHCKSEETNITEGVEVERSVVYSLADGWPLSDDSERAKLLEKIRAVFDMLIRHKCLAASHLSKVIQFAMDEIHGLAAGSQLLNHGLDQSPTCICFLGAHQLKKILKFLQELSHTCGLGRYADKSTSPMDDLHNSNQIPEIKEKIVLNGDASCLLLDECLVPAEITPGATKSAALDDVITPTSNDVVLHNTGPFLSWIFSGSSCGDQLTSWMRTKEDKRNQGMELLQTLEKEFYHLQSLSEKKCERLNYEEALQVVEDLCLEEGKKRENFTEFVQQNYGSVLRNRREELIESENDVMYVSNRFELDAITNVLQEAEAMNVNQFGYGENYTGGCDVESGEDDEWRTKQMDSYIEIAIQKLKENLSVELSKIDGRIMRNVTEMQQLELKLEPVSAFDYRAILLPLVKSYLRARLEDLAEKDATEKSDAAREAFLAELALDSKKGVKGGSDGAKHMEKTKDKKKNKENRKTRDLKATYGHEQLILDTATPDSYSAAPDNDHDSILVSTISADLEQLEEEVRRKIELEEEEKKLEETLELQRRIENEAKLKHLAEQQKKSSVTYLEKSADKFLDCQLRAVADGPEVHEHMRPPMLEQLPNINGYPSNSDGVHIATSNGSAVPDISLLDSVNQTIHHKHPTNIKQADLSCKIAPENDFQLAEQRTGKKGKRHKNSSRLVVGKFEAVSLDKENTDAYTDNQSREQVKFHNNQDANNVQGDNGLMTLKELQVEHDEEERFQADLKKAVRQSLDTYQALQNLPPVSRLGMPDKAALQVNNFGAPLEENTTENVNGGTLLGTGLKNEVGEYNCFLNVIIQSLWHLRLFRKEFLRRPRSEHDHVGNPCVVCALYEIFTAMEIASKDFRGEAVAPTSLRIALSNLCPDSNFFQEAQMNDASEVLAVIFDCLHRSFTHDSSVSETESVESNSMRSWDCANSSCIAHSLFGMDIFERMNCQHCGLESRHMKYTSFFHNINANSLRTMKLMCSESSFDDILNLVEMNHQLACDPEAGGCGKLNYIHHFLSKPPYVFTTVLGWQKTCESADDIKATLATLSTDMDISVLYRGLDPKSIHSLVSVVCYYGQHYHCFAYSHEHEQWIMYDDKTVKVIGGWLDVLTMCERGHLQPQVLFFEAVN 1637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1586 1637 Gene3D Cysteine proteinases 1287 1635 - -
Prci9g1586 1637 MobiDBLite consensus disorder prediction 955 984 - -
Prci9g1586 1637 Coils Coil 202 222 - -
Prci9g1586 1637 Coils Coil 1014 1054 - -
Prci9g1586 1637 Pfam Protein of unknown function (DUF629) 344 868 IPR006865 -
Prci9g1586 1637 MobiDBLite consensus disorder prediction 953 984 - -
Prci9g1586 1637 Gene3D Tetratricopeptide repeat domain 35 296 IPR011990 GO:0005515
Prci9g1586 1637 MobiDBLite consensus disorder prediction 291 333 - -
Prci9g1586 1637 Pfam Ubiquitin carboxyl-terminal hydrolase 1305 1612 IPR001394 GO:0004843|GO:0016579
Prci9g1586 1637 Pfam Protein of unknown function (DUF627) 74 184 IPR006866 -
Prci9g1586 1637 MobiDBLite consensus disorder prediction 37 52 - -
Prci9g1586 1637 MobiDBLite consensus disorder prediction 12 29 - -
Prci9g1586 1637 ProSitePatterns Zinc finger C2H2 type domain signature. 401 422 IPR013087 -
Prci9g1586 1637 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1636 - -
Prci9g1586 1637 Coils Coil 723 743 - -
Prci9g1586 1637 SUPERFAMILY Cysteine proteinases 1304 1634 IPR038765 -
Prci9g1586 1637 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1304 1636 IPR028889 -
Prci9g1586 1637 MobiDBLite consensus disorder prediction 1 62 - -
Prci9g1586 1637 CDD Peptidase_C19 1395 1634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1586 Prci-Chr9 28523617 28534706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1586 60 1634 C2H2 Transcription Factor Family AT3G47890 57.392 0.0 1727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1586 - - pcin:129296941 2360.1