Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1585 ATGGGACATAAAAAGCGAAACCCTGCCCCGCGTTCCAAACAATCGGCGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCCAATGGCCCTGCCTCAGCCGAGTCCGAGTTGTGCAGGAGTTCTAATCACACTATTCAAAGCGCGAGTAAGATCGAGCTGCCTCCTCACCCCGAGCCGTCGGCCTACTCCACTATCAAGCTTGAATGTGAACGAGCCCTCAATGCGCTCAGGCGTGGCAACCACACAAAGGCACTGAGGCTTATGAAGGAGTTATGCTCCAGACACGAGAGCTCCGCTTACTCGGCCTTGATTCACCGAGTTCAAGGTACCATCTGTGTCAAAGTGGCCTCAATTATTGATGATCCAAGTGCGAAGCAAAGACATTTGAAGCATGCTATTGAGTCTGCCCGAAAAGCCGCGGAGCAATCGCCCAGTTCTATTGAGTTCGCACATTTTTATGCAAATTTGTTATACGAGGCAGCGAATGATTCGACTGAATACGAGCAGGTGGTGAAGGAGTGTGAAAAAGCACTCGGGATTTCAAATCCAATTGATCCTGCGAAGGAGAGCTTGCAGGACGAGAGCCAGCAGAAAATATCAACTGCAGACGCCCGGATAGTACATGTTCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTGTCAACGTGGATGAAGAATCTTGGTAATGGGGAGGAGAAATTCCGTTTGATTCCGATAAGGAGGGCTACAGAGGACCCAATGGAGGTGAGGTTAGTTCAAGCTAGAAGGCCAAATGAGATAAAAAAGGTGACCAAGACACCTGAGGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTGCTGCAGCAAAAGTCAGAGTCACCCCAATCCCAGAACGAAGGGGACAGGGATGACAGGACATTGGATTCATCTTCAGGGTCTGGGCAGAGGATAAGTGAGAGGCGGAAGTATGGACATGTCCGAAAAGCTGGCTCTACATCTGAAAGGAGAGATTGGGTACGTTTATATTGGAATTCGATGAGTATTGATTTGAAGAAGGAGTTTCTTAGGATTAGGATATGTGATCTCAAATCTCACTTTGGCTCTTCAAAGGATACTTTGCTGAATGACATAGTAGCAGAAGCTTTGTCGTATGCTGAGGCTAACAAAACGTGGAAATTCTGGCTTTGCTGCCGCTGTAGTGAGAAGTTTTCAGATTCAGAATCTCACATGCAGCATGTTGTGCAGGAACACCTGGGGAATCTCTTACCTAAAATGCAGAGACTTTTACCTCAAAATGTAGACAATGAATGGATTGAGATGATTCTTAGCTGTTCTTGGAAAGCTCTGGATGCCTCTGCTGCAGTCAAAATGCTTGAAAATCAAGCAAAATGCAAAGATTTTTCGTTTCCTGAGGATACCTATATTGATCATACTGAGGAGCACCATTATTGCTTTAAAGACGCTAATAATTCTTTACCTGAAAGGGGACATAGCCTTGCTACCTGTGCACCAAATATAAGTAATCATTGTAAATCTGAGGAAACTAATATTACAGAAGGTGTTGAAGTTGAACGGTCTGTAGTATATTCCCTTGCAGATGGTTGGCCATTGTCAGATGACTCTGAGCGTGCAAAACTTCTTGAGAAAATTCGTGCAGTTTTTGATATGCTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTAGCAAGGTCATACAATTTGCCATGGATGAGATTCATGGACTTGCTGCTGGGTCTCAGCTTCTAAACCATGGTTTAGACCAGTCACCAACGTGCATATGCTTTTTAGGAGCCCATCAACTTAAGAAAATTCTCAAATTTTTGCAGGAACTATCACATACTTGTGGTTTGGGTAGATATGCTGATAAAAGTACTAGTCCCATGGATGATTTACACAATTCAAATCAAATTCCTGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTAGATGAATGTTTAGTGCCTGCAGAAATCACTCCAGGTTCATCTTGTGGAGATCAATTGACCTCATGGATGAGAACAAAAGAAGATAAAAGAAATCAAGGAATGGAACTTCTCCAGACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTCTCTGAGAAGAAATGTGAGCGCTTGAATTATGAGGAAGCACTGCAGGTAGTAGAGGACCTTTGTCTAGAAGAAGGTAAGAAGAGGGAAAATTTCACTGAATTTGTTCAGCAAAACTATGGATCTGTTCTCAGAAACCGGAGAGAAGAGCTCATTGAGAGTGAGAATGATGTCATGTATGTTAGCAATAGATTTGAGTTGGATGCTATAACAAATGTACTGCAAGAAGCAGAGGCAATGAATGTTAATCAATTTGGTTATGGGGAAAATTATACTGGTGGATGTGACGTGGAATCAGGTGAAGATGATGAATGGAGAACAAAACAAATGGATAGCTACATAGAAATAGCCATTCAGAAACTGAAGGAAAACCTATCTGTGGAGCTTAGCAAAATTGATGGACGGATCATGAGAAATGTTACAGAGATGCAGCAGTTGGAGCTCAAGCTTGAGCCTGTTTCTGCTTTTGATTATCGTGCAATATTACTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTGGAAGATTTGGCTGAGAAGGATGCGACGGAGAAGTCTGATGCTGCAAGGGAAGCATTTTTGGCCGAGCTTGCTCTTGATTCAAAGAAGGGTGTCAAGGGGGGAAGTGATGGTGCAAAACATATGGAGAAAACGAAAGATAAGAAAAAAAATAAAGAGAACAGGAAAACAAGGGATTTGAAGGCTACATATGGTCATGAGCAGCTCATTCTGGACACTGCTACTCCCGATTCTTATTCTGCTGCGCCTGATAATGACCATGATTCCATTCTTGTTTCTACAATTAGTGCTGACTTGGAACAACTGGAAGAGGAAGTGAGACGTAAAATTGAGTTAGAAGAAGAGGAAAAAAAACTTGAAGAAACTTTGGAGTTACAACGACGAATAGAAAATGAGGCTAAACTGAAGCACCTCGCTGAGCAGCAAAAGAAATCTTCTGTGACGTATTTGGAGAAGTCAGCTGACAAATTTCTGGATTGTCAGTTAAGGGCTGTTGCTGATGGTCCAGAAGTTCATGAACATATGAGACCGCCTATGCTGGAGCAGTTGCCAAATATTAATGGTTACCCTAGCAATTCAGATGGTGTGCATATTGCCACATCAAATGGTTCTGCGGTACCAGACATATCTTTACTCGATTCAGTTAATCAAACTATTCATCATAAGCATCCAACAAATATCAAACAAGCAGATCTGTCTTGCAAAATAGCTCCTGAAAATGATTTTCAGCTGGCTGAGCAGCGGACAGGTAAAAAGGGTAAACGGCATAAAAATTCTTCCAGATTGGTTGTTGGAAAGTTTGAGGCTGTCTCATTGGATAAAGAGAACACTGATGCATATACCGACAATCAGTCAAGAGAGCAGGTTAAATTCCACAACAATCAGGATGCTAACAACGTGCAAGGAGACAATGGCTTAATGACTCTGAAAGAGTTACAAGTGGAGCATGATGAGGAGGAAAGGTTCCAAGCTGACCTAAAAAAAGCTGTGCGCCAAAGTCTGGACACATATCAAGCTCTTCAAAATTTGCCTCCAGTTTCTAGATTGGGAATGCCAGATAAAGCTGCTTTGCAAGTCAATAATTTTGGTGCTCCACTGGAGGAAAACACTACTGAGAATGTCAATGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTGGGTGAATATAATTGCTTTCTCAATGTTATAATACAATCTTTGTGGCATTTGCGACTTTTTCGCAAGGAATTTCTTAGAAGACCAAGATCAGAGCATGATCATGTGGGTAATCCTTGTGTTGTCTGTGCCTTGTATGAAATCTTCACTGCCATGGAAATTGCATCAAAGGATTTTAGGGGAGAAGCTGTAGCCCCTACTTCTCTGAGAATAGCTCTAAGCAACCTATGTCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTCCTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCATGATTCAAGTGTTTCTGAGACAGAATCAGTGGAAAGCAATTCCATGAGGTCTTGGGATTGTGCAAACAGTAGTTGCATAGCACATTCACTCTTTGGAATGGACATTTTTGAACGAATGAACTGCCAACATTGTGGTCTCGAGTCCAGGCATATGAAGTACACTTCCTTCTTCCACAATATAAATGCCAACTCCCTTCGGACCATGAAGCTCATGTGTAGCGAAAGCTCCTTTGATGATATCTTGAATCTAGTGGAGATGAATCATCAGTTAGCTTGTGATCCGGAAGCTGGCGGCTGTGGCAAGCTAAATTACATCCATCACTTTCTTTCAAAACCACCTTATGTTTTCACGACTGTTCTAGGTTGGCAAAAGACATGTGAGAGTGCTGATGATATTAAAGCAACTTTGGCAACACTGAGCACTGACATGGACATTAGTGTTCTTTATCGTGGATTAGATCCAAAAAGCATTCATAGCTTGGTTTCAGTGGTATGCTACTATGGGCAACATTATCATTGCTTTGCTTATAGCCATGAACATGAACAATGGATTATGTATGATGACAAGACAGTCAAGGTAATTGGTGGGTGGCTTGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4815 0.4249 MGHKKRNPAPRSKQSAAASPVTQSAIGGAANGPASAESELCRSSNHTIQSASKIELPPHPEPSAYSTIKLECERALNALRRGNHTKALRLMKELCSRHESSAYSALIHRVQGTICVKVASIIDDPSAKQRHLKHAIESARKAAEQSPSSIEFAHFYANLLYEAANDSTEYEQVVKECEKALGISNPIDPAKESLQDESQQKISTADARIVHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRATEDPMEVRLVQARRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSQNEGDRDDRTLDSSSGSGQRISERRKYGHVRKAGSTSERRDWVRLYWNSMSIDLKKEFLRIRICDLKSHFGSSKDTLLNDIVAEALSYAEANKTWKFWLCCRCSEKFSDSESHMQHVVQEHLGNLLPKMQRLLPQNVDNEWIEMILSCSWKALDASAAVKMLENQAKCKDFSFPEDTYIDHTEEHHYCFKDANNSLPERGHSLATCAPNISNHCKSEETNITEGVEVERSVVYSLADGWPLSDDSERAKLLEKIRAVFDMLIRHKCLAASHLSKVIQFAMDEIHGLAAGSQLLNHGLDQSPTCICFLGAHQLKKILKFLQELSHTCGLGRYADKSTSPMDDLHNSNQIPEIKEKIVLNGDASCLLLDECLVPAEITPGSSCGDQLTSWMRTKEDKRNQGMELLQTLEKEFYHLQSLSEKKCERLNYEEALQVVEDLCLEEGKKRENFTEFVQQNYGSVLRNRREELIESENDVMYVSNRFELDAITNVLQEAEAMNVNQFGYGENYTGGCDVESGEDDEWRTKQMDSYIEIAIQKLKENLSVELSKIDGRIMRNVTEMQQLELKLEPVSAFDYRAILLPLVKSYLRARLEDLAEKDATEKSDAAREAFLAELALDSKKGVKGGSDGAKHMEKTKDKKKNKENRKTRDLKATYGHEQLILDTATPDSYSAAPDNDHDSILVSTISADLEQLEEEVRRKIELEEEEKKLEETLELQRRIENEAKLKHLAEQQKKSSVTYLEKSADKFLDCQLRAVADGPEVHEHMRPPMLEQLPNINGYPSNSDGVHIATSNGSAVPDISLLDSVNQTIHHKHPTNIKQADLSCKIAPENDFQLAEQRTGKKGKRHKNSSRLVVGKFEAVSLDKENTDAYTDNQSREQVKFHNNQDANNVQGDNGLMTLKELQVEHDEEERFQADLKKAVRQSLDTYQALQNLPPVSRLGMPDKAALQVNNFGAPLEENTTENVNGGTLLGTGLKNEVGEYNCFLNVIIQSLWHLRLFRKEFLRRPRSEHDHVGNPCVVCALYEIFTAMEIASKDFRGEAVAPTSLRIALSNLCPDSNFFQEAQMNDASEVLAVIFDCLHRSFTHDSSVSETESVESNSMRSWDCANSSCIAHSLFGMDIFERMNCQHCGLESRHMKYTSFFHNINANSLRTMKLMCSESSFDDILNLVEMNHQLACDPEAGGCGKLNYIHHFLSKPPYVFTTVLGWQKTCESADDIKATLATLSTDMDISVLYRGLDPKSIHSLVSVVCYYGQHYHCFAYSHEHEQWIMYDDKTVKVIGGWLDVLTMCERGHLQPQVLFFEAVN 1604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1585 1604 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1603 - -
Prci9g1585 1604 Coils Coil 202 222 - -
Prci9g1585 1604 MobiDBLite consensus disorder prediction 291 333 - -
Prci9g1585 1604 MobiDBLite consensus disorder prediction 922 951 - -
Prci9g1585 1604 Pfam Ubiquitin carboxyl-terminal hydrolase 1272 1579 IPR001394 GO:0004843|GO:0016579
Prci9g1585 1604 SUPERFAMILY Cysteine proteinases 1271 1601 IPR038765 -
Prci9g1585 1604 MobiDBLite consensus disorder prediction 37 52 - -
Prci9g1585 1604 MobiDBLite consensus disorder prediction 12 29 - -
Prci9g1585 1604 Pfam Protein of unknown function (DUF627) 74 184 IPR006866 -
Prci9g1585 1604 Coils Coil 690 710 - -
Prci9g1585 1604 ProSitePatterns Zinc finger C2H2 type domain signature. 401 422 IPR013087 -
Prci9g1585 1604 CDD Peptidase_C19 1362 1601 - -
Prci9g1585 1604 MobiDBLite consensus disorder prediction 920 951 - -
Prci9g1585 1604 Pfam Protein of unknown function (DUF629) 678 835 IPR006865 -
Prci9g1585 1604 Pfam Protein of unknown function (DUF629) 344 676 IPR006865 -
Prci9g1585 1604 Gene3D Cysteine proteinases 1254 1602 - -
Prci9g1585 1604 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1271 1603 IPR028889 -
Prci9g1585 1604 Coils Coil 981 1021 - -
Prci9g1585 1604 Gene3D Tetratricopeptide repeat domain 35 296 IPR011990 GO:0005515
Prci9g1585 1604 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1585 Prci-Chr9 28523600 28534706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1585 60 1601 C2H2 Transcription Factor Family AT3G47890 56.706 0.0 1696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1585 - - pcin:129296941 2276.9