Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1584 ATGGGACATAAAAAGCGAAACCCTGCCCCGCGTTCCAAACAATCGGCGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCCAATGGCCCTGCCTCAGCCGAGTCCGAGTTGTGCAGGAGTTCTAATCACACTATTCAAAGCGCGAGTAAGATCGAGCTGCCTCCTCACCCCGAGCCGTCGGCCTACTCCACTATCAAGCTTGAATGTGAACGAGCCCTCAATGCGCTCAGGCGTGGCAACCACACAAAGGCACTGAGGCTTATGAAGGAGTTATGCTCCAGACACGAGAGCTCCGCTTACTCGGCCTTGATTCACCGAGTTCAAGGTACCATCTGTGTCAAAGTGGCCTCAATTATTGATGATCCAAGTGCGAAGCAAAGACATTTGAAGCATGCTATTGAGTCTGCCCGAAAAGCCGCGGAGCAATCGCCCAGTTCTATTGAGTTCGCACATTTTTATGCAAATTTGTTATACGAGGCAGCGAATGATTCGACTGAATACGAGCAGGTGGTGAAGGAGTGTGAAAAAGCACTCGGGATTTCAAATCCAATTGATCCTGCGAAGGAGAGCTTGCAGGACGAGAGCCAGCAGAAAATATCAACTGCAGACGCCCGGATAGTACATGTTCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTGTCAACGTGGATGAAGAATCTTGGTAATGGGGAGGAGAAATTCCGTTTGATTCCGATAAGGAGGGCTACAGAGGACCCAATGGAGGTGAGGTTAGTTCAAGCTAGAAGGCCAAATGAGATAAAAAAGGTGACCAAGACACCTGAGGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTGCTGCAGCAAAAGTCAGAGTCACCCCAATCCCAGAACGAAGGGGACAGGGATGACAGGACATTGGATTCATCTTCAGGGTCTGGGCAGAGGATAAGTGAGAGGCGGAAGTATGGACATGTCCGAAAAGCTGGCTCTACATCTGAAAGGAGAGATTGGGTACGTTTATATTGGAATTCGATGAGTATTGATTTGAAGAAGGAGTTTCTTAGGATTAGGATATGTGATCTCAAATCTCACTTTGGCTCTTCAAAGGATACTTTGCTGAATGACATAGTAGCAGAAGCTTTGTCGTATGCTGAGGCTAACAAAACGTGGAAATTCTGGCTTTGCTGCCGCTGTAGTGAGAAGTTTTCAGATTCAGAATCTCACATGCAGCATGTTGTGCAGGAACACCTGGGGAATCTCTTACCTAAAATGCAGAGACTTTTACCTCAAAATGTAGACAATGAATGGATTGAGATGATTCTTAGCTGTTCTTGGAAAGCTCTGGATGCCTCTGCTGCAGTCAAAATGCTTGAAAATCAAGCAAAATGCAAAGATTTTTCGTTTCCTGAGGATACCTATATTGATCATACTGAGGAGCACCATTATTGCTTTAAAGACGCTAATAATTCTTTACCTGAAAGGGGACATAGCCTTGCTACCTGTGCACCAAATATAAGTAATCATTGTAAATCTGAGGAAACTAATATTACAGAAGGTGTTGAAGTTGAACGGTCTGTAGTATATTCCCTTGCAGATGGTTGGCCATTGTCAGATGACTCTGAGCGTGCAAAACTTCTTGAGAAAATTCGTGCAGTTTTTGATATGCTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTAGCAAGGTCATACAATTTGCCATGGATGAGATTCATGGACTTGCTGCTGGGTCTCAGCTTCTAAACCATGGTTTAGACCAGTCACCAACGTGCATATGCTTTTTAGGAGCCCATCAACTTAAGAAAATTCTCAAATTTTTGCAGGAACTATCACATACTTGTGGTTTGGGTAGATATGCTGATAAAAGTACTAGTCCCATGGATGATTTACACAATTCAAATCAAATTCCTGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTAGATGAATGTTTAGTGCCTGCAGAAATCACTCCAGGTGCTACTAAGAGTGCTGCATTGGATGATGTAATTACCCCAACTTCTAATGACGTAGTTTTACATAACACCGGTCCTTTCCTATCTTGGATATTTTCAGGTTCATCTTGTGGAGATCAATTGACCTCATGGATGAGAACAAAAGAAGATAAAAGAAATCAAGGAATGGAACTTCTCCAGACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTCTCTGAGAAGAAATGTGAGCGCTTGAATTATGAGGAAGCACTGCAGGTAGTAGAGGACCTTTGTCTAGAAGAAGGTAAGAAGAGGGAAAATTTCACTGAATTTGTTCAGCAAAACTATGGATCTGTTCTCAGAAACCGGAGAGAAGAGCTCATTGAGAGTGAGAATGATGTCATGTATGTTAGCAATAGATTTGAGTTGGATGCTATAACAAATGTACTGCAAGAAGCAGAGGCAATGAATGTTAATCAATTTGGTTATGGGGAAAATTATACTGGTGGATGTGACGTGGAATCAGGTGAAGATGATGAATGGAGAACAAAACAAATGGATAGCTACATAGAAATAGCCATTCAGAAACTGAAGGAAAACCTATCTGTGGAGCTTAGCAAAATTGATGGACGGATCATGAGAAATGTTACAGAGATGCAGCAGTTGGAGCTCAAGCTTGAGCCTGTTTCTGCTTTTGATTATCGTGCAATATTACTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTGGAAGATTTGGCTGAGAAGGATGCGACGGAGAAGTCTGATGCTGCAAGGGAAGCATTTTTGGCCGAGCTTGCTCTTGATTCAAAGAAGGGTGTCAAGGGGGGAAGTGATGGTGCAAAACATATGGAGAAAACGAAAGATAAGAAAAAAAATAAAGAGAACAGGAAAACAAGGGATTTGAAGGCTACATATGGTCATGAGCAGCTCATTCTGGACACTGCTACTCCCGATGCTGACTTGGAACAACTGGAAGAGGAAGTGAGACGTAAAATTGAGTTAGAAGAAGAGGAAAAAAAACTTGAAGAAACTTTGGAGTTACAACGACGAATAGAAAATGAGGCTAAACTGAAGCACCTCGCTGAGCAGCAAAAGAAATCTTCTGTGACGTATTTGGAGAAGTCAGCTGACAAATTTCTGGATTGTCAGTTAAGGGCTGTTGCTGATGGTCCAGAAGTTCATGAACATATGAGACCGCCTATGCTGGAGCAGTTGCCAAATATTAATGGTTACCCTAGCAATTCAGATGGTGTGCATATTGCCACATCAAATGGTTCTGCGGTACCAGACATATCTTTACTCGATTCAGTTAATCAAACTATTCATCATAAGCATCCAACAAATATCAAACAAGCAGATCTGTCTTGCAAAATAGCTCCTGAAAATGATTTTCAGCTGGCTGAGCAGCGGACAGGTAAAAAGGGTAAACGGCATAAAAATTCTTCCAGATTGGTTGTTGGAAAGTTTGAGGCTGTCTCATTGGATAAAGAGAACACTGATGCATATACCGACAATCAGTCAAGAGAGCAGGTTAAATTCCACAACAATCAGGATGCTAACAACGTGCAAGGAGACAATGGCTTAATGACTCTGAAAGAGTTACAAGTGGAGCATGATGAGGAGGAAAGGTTCCAAGCTGACCTAAAAAAAGCTGTGCGCCAAAGTCTGGACACATATCAAGCTCTTCAAAATTTGCCTCCAGTTTCTAGATTGGGAATGCCAGATAAAGCTGCTTTGCAAGTCAATAATTTTGGTGCTCCACTGGAGGAAAACACTACTGAGAATGTCAATGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTGGGTGAATATAATTGCTTTCTCAATGTTATAATACAATCTTTGTGGCATTTGCGACTTTTTCGCAAGGAATTTCTTAGAAGACCAAGATCAGAGCATGATCATGTGGGTAATCCTTGTGTTGTCTGTGCCTTGTATGAAATCTTCACTGCCATGGAAATTGCATCAAAGGATTTTAGGGGAGAAGCTGTAGCCCCTACTTCTCTGAGAATAGCTCTAAGCAACCTATGTCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAAGTCCTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCATGATTCAAGTGTTTCTGAGACAGAATCAGTGGAAAGCAATTCCATGAGGTCTTGGGATTGTGCAAACAGTAGTTGCATAGCACATTCACTCTTTGGAATGGACATTTTTGAACGAATGAACTGCCAACATTGTGGTCTCGAGTCCAGGCATATGAAGTACACTTCCTTCTTCCACAATATAAATGCCAACTCCCTTCGGACCATGAAGCTCATGTGTAGCGAAAGCTCCTTTGATGATATCTTGAATCTAGTGGAGATGAATCATCAGTTAGCTTGTGATCCGGAAGCTGGCGGCTGTGGCAAGCTAAATTACATCCATCACTTTCTTTCAAAACCACCTTATGTTTTCACGACTGTTCTAGGTTGGCAAAAGACATGTGAGAGTGCTGATGATATTAAAGCAACTTTGGCAACACTGAGCACTGACATGGACATTAGTGTTCTTTATCGTGGATTAGATCCAAAAAGCATTCATAGCTTGGTTTCAGTGGTATGCTACTATGGGCAACATTATCATTGCTTTGCTTATAGCCATGAACATGAACAATGGATTATGTATGATGACAAGACAGTCAAGGTAATTGGTGGGTGGCTTGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAA 4857 0.425 MGHKKRNPAPRSKQSAAASPVTQSAIGGAANGPASAESELCRSSNHTIQSASKIELPPHPEPSAYSTIKLECERALNALRRGNHTKALRLMKELCSRHESSAYSALIHRVQGTICVKVASIIDDPSAKQRHLKHAIESARKAAEQSPSSIEFAHFYANLLYEAANDSTEYEQVVKECEKALGISNPIDPAKESLQDESQQKISTADARIVHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRATEDPMEVRLVQARRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSQNEGDRDDRTLDSSSGSGQRISERRKYGHVRKAGSTSERRDWVRLYWNSMSIDLKKEFLRIRICDLKSHFGSSKDTLLNDIVAEALSYAEANKTWKFWLCCRCSEKFSDSESHMQHVVQEHLGNLLPKMQRLLPQNVDNEWIEMILSCSWKALDASAAVKMLENQAKCKDFSFPEDTYIDHTEEHHYCFKDANNSLPERGHSLATCAPNISNHCKSEETNITEGVEVERSVVYSLADGWPLSDDSERAKLLEKIRAVFDMLIRHKCLAASHLSKVIQFAMDEIHGLAAGSQLLNHGLDQSPTCICFLGAHQLKKILKFLQELSHTCGLGRYADKSTSPMDDLHNSNQIPEIKEKIVLNGDASCLLLDECLVPAEITPGATKSAALDDVITPTSNDVVLHNTGPFLSWIFSGSSCGDQLTSWMRTKEDKRNQGMELLQTLEKEFYHLQSLSEKKCERLNYEEALQVVEDLCLEEGKKRENFTEFVQQNYGSVLRNRREELIESENDVMYVSNRFELDAITNVLQEAEAMNVNQFGYGENYTGGCDVESGEDDEWRTKQMDSYIEIAIQKLKENLSVELSKIDGRIMRNVTEMQQLELKLEPVSAFDYRAILLPLVKSYLRARLEDLAEKDATEKSDAAREAFLAELALDSKKGVKGGSDGAKHMEKTKDKKKNKENRKTRDLKATYGHEQLILDTATPDADLEQLEEEVRRKIELEEEEKKLEETLELQRRIENEAKLKHLAEQQKKSSVTYLEKSADKFLDCQLRAVADGPEVHEHMRPPMLEQLPNINGYPSNSDGVHIATSNGSAVPDISLLDSVNQTIHHKHPTNIKQADLSCKIAPENDFQLAEQRTGKKGKRHKNSSRLVVGKFEAVSLDKENTDAYTDNQSREQVKFHNNQDANNVQGDNGLMTLKELQVEHDEEERFQADLKKAVRQSLDTYQALQNLPPVSRLGMPDKAALQVNNFGAPLEENTTENVNGGTLLGTGLKNEVGEYNCFLNVIIQSLWHLRLFRKEFLRRPRSEHDHVGNPCVVCALYEIFTAMEIASKDFRGEAVAPTSLRIALSNLCPDSNFFQEAQMNDASEVLAVIFDCLHRSFTHDSSVSETESVESNSMRSWDCANSSCIAHSLFGMDIFERMNCQHCGLESRHMKYTSFFHNINANSLRTMKLMCSESSFDDILNLVEMNHQLACDPEAGGCGKLNYIHHFLSKPPYVFTTVLGWQKTCESADDIKATLATLSTDMDISVLYRGLDPKSIHSLVSVVCYYGQHYHCFAYSHEHEQWIMYDDKTVKVIGGWLDVLTMCERGHLQPQVLFFEAVN 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1584 1618 SUPERFAMILY Cysteine proteinases 1285 1615 IPR038765 -
Prci9g1584 1618 MobiDBLite consensus disorder prediction 955 982 - -
Prci9g1584 1618 Coils Coil 202 222 - -
Prci9g1584 1618 CDD Peptidase_C19 1376 1615 - -
Prci9g1584 1618 Gene3D Cysteine proteinases 1268 1616 - -
Prci9g1584 1618 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1285 1617 IPR028889 -
Prci9g1584 1618 MobiDBLite consensus disorder prediction 291 333 - -
Prci9g1584 1618 Pfam Ubiquitin carboxyl-terminal hydrolase 1286 1593 IPR001394 GO:0004843|GO:0016579
Prci9g1584 1618 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1617 - -
Prci9g1584 1618 MobiDBLite consensus disorder prediction 37 52 - -
Prci9g1584 1618 MobiDBLite consensus disorder prediction 12 29 - -
Prci9g1584 1618 Pfam Protein of unknown function (DUF627) 74 184 IPR006866 -
Prci9g1584 1618 MobiDBLite consensus disorder prediction 953 982 - -
Prci9g1584 1618 ProSitePatterns Zinc finger C2H2 type domain signature. 401 422 IPR013087 -
Prci9g1584 1618 Coils Coil 723 743 - -
Prci9g1584 1618 Coils Coil 999 1035 - -
Prci9g1584 1618 Pfam Protein of unknown function (DUF629) 344 868 IPR006865 -
Prci9g1584 1618 Gene3D Tetratricopeptide repeat domain 35 296 IPR011990 GO:0005515
Prci9g1584 1618 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1584 Prci-Chr9 28523600 28534706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1584 60 1615 C2H2 Transcription Factor Family AT3G47890 57.268 0.0 1720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1584 - - pcin:129296941 2311.95