Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1565 ATGGAGTTTGCTCTGTGCAGATCTGGCCAAGAAGGTGAATCAGTCAAGGAAGACAAGAGAAGTGAATCTACTGCTGCTGATAATCATGAAGCCGCTCATCATCAAGAAGATACTACTGTTCTCGAGGTACCACCCATGAAAAACACCACCAATAGATTCGTCGTGGAGGCTGGACCACCTCATGCATCCTCAGCCAAAAATGAAGAGGTTGATGGTGAACTTGAATCTGCGAGAGTAGAAATGGGTGAGGTGAGAGAAGAAAACCAAAGGCTAAAGATGTGTTTGGACCGAATCATGAAGGAATATCAGGCCCTGCAAATGCAATTTCATGTTATGGCTCAACAAGAGGCAACGAAATCTTCTGATCCAAAAGCAAATGTTGATGACGAGCAAGAGCCAGCTGAGGAATCGGATCTGGTTTCCCTCAGTCTCGGAAGAGTTCCGGTTGCCACCATCAGTAAACCAAAATCTGACGAGCAAACTAAAGTCATCAGCAGCAGCTCCAAACCATCATTACATTTACGACGAGAGGAAGAAGAAGAGGGATTCAAACAAGACTTGGCTCTTGGACTGGACTGCAAATTTGAAACATCAAAATCTGGAAGCACCACTGAAGCTTTGCCAAATCCAAGCCCCACCAATAGTTCTGAATTGGTTCCCAAGGAAGAAGCTGGGGAGAGCTGGCCACCAAGTAAGGCACTTAAAACTGCCAGAGATTCCACAGATCAAGATGAAGTTTCCCAACAAAATCCAGCTAAGAAGACCAGAGTTTGCGTGAGAGCAAGATGTGACACCCCAACTTTGAATGATGGATGCCAATGGAGGAAATATGGGCAAAAGATATCCAAGGGAAATCCTTGTCCGAGAGCTTATTATCGTTGCACAGTTGCACCAAATTGCCCAGTAAGAAAGCAGGTGCAAAGATGTGCAGAGGACATGTCAGTTCTGATCACTACTTATGAAGGAAACCACAACCACCCTCTTCCTCTCTCTGCTACCGCTATGGCTTCCACCACTTCTGCAGCTGCTTCCATGCTCTTGTCTGGTTCGTCTTCAACCTCTAATCTCCCTGGTTCAGTGCCGTCATCAACAACTGCCGCCATTGGCTCTGATCTCCACGGCATCAACTTCTACCTCTCTGATGGCTCCAAACCAAAGCAATTCTACCTCACCAATCCTGCACTGTCACCTTCACCCTCACACCCAACAATTACCCTCGACCTCACTTCCAACCCATCCTCTTCTAATTATTTCTCTTCACACTTCAATAGATTCAACTCAAGCTACAATAACCCCACTAGATTCCCTTCTTCAGCCAGCCTCAGCTTCAGTTCCTCAGAATCCAACTCAAAGTCCTGGAGTAACAATGTGGGGTTCTTTGGCTACAGCTACAACACTCAACCATATAATAATAACAGGAACATCCTTAGCAGCATCAACCTCGGAAGACAACTACTGATTCAAACTCCTCCCCCTCCCGCTCCCGCTCCCGCTCCCGCTCCCGCTCCCCCTCCTCAAGTACAAAATCCTTCGCTGCCAGACACCATAGCTGCAGCAACTAAAGTGATAACAGCTGATCCAGCTTTTCATTCAGCTTTGGCCGCTGCGCTTTCTTCCATCATCGGCACAGGAAATAATGGTAGTGTGAGTGAAAGTAGCACACAAGGTGTTGGAGAAATCAATCCCGGTCAGAAAATTAACCTATGGGGAGATATTTTTGCAGCTTCTGCAGCTGGATCAACCTCCAAAATTAGTGGATGTGCTTCTAGCTTCTTGAGTAAAACGACGCCGGCTGGTACACAATCAGGAAGTAGTGGTTTGATGTTTCTACCTCCATCCTTGCCATTTTCTAGCTCCAAGACCGCGTCTACGTTATCACCGACTGATAATAGAGACAGGTCCAACAATTCTTGA 1914 0.4655 MEFALCRSGQEGESVKEDKRSESTAADNHEAAHHQEDTTVLEVPPMKNTTNRFVVEAGPPHASSAKNEEVDGELESARVEMGEVREENQRLKMCLDRIMKEYQALQMQFHVMAQQEATKSSDPKANVDDEQEPAEESDLVSLSLGRVPVATISKPKSDEQTKVISSSSKPSLHLRREEEEEGFKQDLALGLDCKFETSKSGSTTEALPNPSPTNSSELVPKEEAGESWPPSKALKTARDSTDQDEVSQQNPAKKTRVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPNCPVRKQVQRCAEDMSVLITTYEGNHNHPLPLSATAMASTTSAAASMLLSGSSSTSNLPGSVPSSTTAAIGSDLHGINFYLSDGSKPKQFYLTNPALSPSPSHPTITLDLTSNPSSSNYFSSHFNRFNSSYNNPTRFPSSASLSFSSSESNSKSWSNNVGFFGYSYNTQPYNNNRNILSSINLGRQLLIQTPPPPAPAPAPAPAPPPQVQNPSLPDTIAAATKVITADPAFHSALAAALSSIIGTGNNGSVSESSTQGVGEINPGQKINLWGDIFAASAAGSTSKISGCASSFLSKTTPAGTQSGSSGLMFLPPSLPFSSSKTASTLSPTDNRDRSNNS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1565 637 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1565 637 MobiDBLite consensus disorder prediction 616 637 - -
Prci9g1565 637 Pfam WRKY DNA -binding domain 269 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1565 637 MobiDBLite consensus disorder prediction 154 170 - -
Prci9g1565 637 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci9g1565 637 MobiDBLite consensus disorder prediction 488 510 - -
Prci9g1565 637 MobiDBLite consensus disorder prediction 198 220 - -
Prci9g1565 637 MobiDBLite consensus disorder prediction 66 80 - -
Prci9g1565 637 Gene3D WRKY domain 252 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci9g1565 637 Coils Coil 67 87 - -
Prci9g1565 637 MobiDBLite consensus disorder prediction 198 255 - -
Prci9g1565 637 MobiDBLite consensus disorder prediction 114 183 - -
Prci9g1565 637 MobiDBLite consensus disorder prediction 11 37 - -
Prci9g1565 637 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 553 IPR044810 GO:0003700
Prci9g1565 637 MobiDBLite consensus disorder prediction 1 80 - -
Prci9g1565 637 MobiDBLite consensus disorder prediction 487 512 - -
Prci9g1565 637 FunFam probable WRKY transcription factor 31 253 330 - -
Prci9g1565 637 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1565 Prci-Chr9 28358744 28362825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1565 81 543 WRKY Transcription Factor Family AT5G15130 42.653 1.05e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci9g1565 WRKY 6.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1565 - - gmx:100804403 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2986 4 41598119 41601507 Prci9g1565 9 28358744 28362825 ECH
Prci9g1565 9 28358744 28362825 Prci9g1565 9 28358744 28362825 ECH