Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1561 ATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTCCTATTTGGAAAAAAGTCATCCAAATCAAATATTCCCAAAGGAAGAGAGAAACTTGTTAACCAGAAGGAAGCATTGGTTGCTTCCAAGGCATCAGAAACTGGGGTGGCTTTAGAACCACCCCCCTTTACTGTTGCCAGAAATGAGGAAGAGTTGGAATTGGAGAATGAAGAAGCAGAAAATCTTTCTCCTGTGAATCAGGAAACGGATTTTGTGTCCCATGTTCATCAAGATGCACCACCTGATCTAGAGAAAATCAGGCAGGACGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAAGCACTTATTCGTGGGCACTTGGTTCGTAGACAAGCTGTTGCTACATTATGGTCTATGTATGGGATAGTTAAATTTCAGGCACTTGTTCGTGGAGGGAAGGTTAGACAGTCCCATACTGGCTATGAAATCCATGAGAAGTATAATATTTTGAAGCTTCAGGGTGGAAAGCATGCCAATCCAGTTGATATAGCCAGAGAGTTTGCGAAGTTATCAACAAATACTTACACCCGCAAGCTTCTTGCATCATCTGCTACGATAATGGCCTTGCGCCTGCAATATGTTCCTGGTGATCCAAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCCGCATCTCACTTTTGGATACCGATTCCCCAACCCAAGAAAATTCCAAACTCTAGGTCTCAGAGAAAGCAAGGTAATACTTCAACTGGAGAAGTCCAAATGAGCAAGTCAAGACGCACTAACCGGAAGCTTCCAACTGTAAATTCTGACTCAGTCCCAGTACAAGCAAATCCTGAATTTGAGAAACCGAAAAGAAACCTGAGGAAAATATCAAACCCAGCTGCAGATCCAGTGCAGGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAGCGGAGCCTGAGAAAGGTACATAACCCTGTTGTTGAGAATACTAGTCTGCCGGAAGTTGAATCTGAGACCCCTAAACAGCATTCGGAGAAGGCAAACATTACCCCAGGTCATATTGTTTCAGAGCAAGAGGTTGTTAGCTCTAATGAAATATCTAGTGAAGAAGTAACATTGGCCGAGCCTATGCCCAACGTTCCTCATGTGGAAATTGTGGAAATTACTCCTAGACCTTTGGTTAGCAAGGAGGTGTCTGAAATGTCAGGCAGCTATCAAGTGGAATTGGATCCAAAGCCCTTGGTAGAGAATACAAGTAAAGATAAAAATACTCCTGGTGACGGAGCTTTAAATGAGTCAAGAGATCTACCAAAGAGTGGATGTAAAGATGAAAATTCTCCCCTAACAAATGGAGATCTGAATCATAAGGAAGATCCAACAGGCAATGAAAACCAGAAACCCTCCCGGCGAGCCTCAGTTCAAGGGAAACAGGAATGTGCAGAGAATGGTATACAGAGTAGTCCAACATTGCCAAGCTACATGGCTGCAACTGAATCAGCCAAGGCCAAGTTGAGGGCTCAAGGATCGCCAAGGCTTGGACAAGACGGTGGCGAGAGAAACAACTCTGCTCGGCGACATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCACATTCACCAAGAACACAGAGACCAGTTCAACCAGGCAGCAAAGGGGGGCATAAATCTGTTGCATCTAGAGATGGAAACGGAAGAGTAATTCAAGCCGAGTGGAGGAGGTGA 1758 0.4431 MGKSPGKWIKTVLFGKKSSKSNIPKGREKLVNQKEALVASKASETGVALEPPPFTVARNEEELELENEEAENLSPVNQETDFVSHVHQDAPPDLEKIRQDEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLWSMYGIVKFQALVRGGKVRQSHTGYEIHEKYNILKLQGGKHANPVDIAREFAKLSTNTYTRKLLASSATIMALRLQYVPGDPNSVLSWLERWSASHFWIPIPQPKKIPNSRSQRKQGNTSTGEVQMSKSRRTNRKLPTVNSDSVPVQANPEFEKPKRNLRKISNPAADPVQENPQSELEKVKRSLRKVHNPVVENTSLPEVESETPKQHSEKANITPGHIVSEQEVVSSNEISSEEVTLAEPMPNVPHVEIVEITPRPLVSKEVSEMSGSYQVELDPKPLVENTSKDKNTPGDGALNESRDLPKSGCKDENSPLTNGDLNHKEDPTGNENQKPSRRASVQGKQECAENGIQSSPTLPSYMAATESAKAKLRAQGSPRLGQDGGERNNSARRHSLPSSTNSKISSHSPRTQRPVQPGSKGGHKSVASRDGNGRVIQAEWRR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1561 585 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Prci9g1561 585 PANTHER IQ-DOMAIN 5-RELATED 1 548 - -
Prci9g1561 585 Pfam Protein of unknown function (DUF4005) 487 568 IPR025064 -
Prci9g1561 585 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Prci9g1561 585 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Prci9g1561 585 MobiDBLite consensus disorder prediction 408 585 - -
Prci9g1561 585 MobiDBLite consensus disorder prediction 248 325 - -
Prci9g1561 585 MobiDBLite consensus disorder prediction 251 292 - -
Prci9g1561 585 MobiDBLite consensus disorder prediction 534 558 - -
Prci9g1561 585 SMART iq_5 121 142 IPR000048 GO:0005515
Prci9g1561 585 SMART iq_5 98 120 IPR000048 GO:0005515
Prci9g1561 585 Gene3D - 95 148 - -
Prci9g1561 585 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Prci9g1561 585 MobiDBLite consensus disorder prediction 489 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1561 Prci-Chr9 28337990 28343747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1561 1 585 IQD Protein Family AT1G74690 44.390 1.08e-128 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1561 - - gmx:100794636 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g2995 4 41632153 41638018 Prci9g1561 9 28337990 28343747 ECH
Prci9g1561 9 28337990 28343747 Prci9g1561 9 28337990 28343747 ECH