Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1556 ATGGATTCCTTAAAATTCTTCCATGGCTATGGCAAAGTAGGTGATCACCTCGAAGATCAGTCTTCTGTCCCTGCATCTCCCAAGCGCAATACCCTTGTCGCCGCCGTTTCTGTTTTGGCCATCCTCTTCCTCACTCTCACCATCGGAGTCACGCTCGGAGCTCTCATGCACTCATCCGATTCCGGACCACCGGAATCCCGATCGGCCCCTTCCGCCGTCAACACCGACATCGCCTCCTCCATCAGAACCGTCTGCAACGTCACGCACTTCCCGGCCTCCTGCTGCTCCAGTATTTCCTCCCTCACCGCTTCCCTCCAAAACCCTAACGACCCCGAATCCATTCTCAAGCTGTCTCTCCGTGTTTCCCACGACGAGCTTTCTAACCTGTCGTCCTCCCTCAGAAGCTTGGCTTCGACCTCGAACGCGTTGGCTCTCTCTGATTGTAAGGATCAGATCGATGACGCGCTGAGTCGACTCAACGACTCGGTGTTGGCGATGGATGTGGCTCCCGGCGACAAGGCGTTGACGGATGCGAAGATCAACGACATACAGACGTGGATCAGCGCGGCGTTGACGGATCAGGAAACGTGTTTGGATGGATTGGAGGAGACGGAGTCGGCGGAGCTGGGGGAGGTGAAGGGGAAGATGCAGAGGTCGAGGGAGTACACAAGCAACAGCTTAGCCATCGCTGCAAATATTCGCATCTTGCTGCAACGCTTCAATGTGCGCCTCCATTGA 738 0.5583 MDSLKFFHGYGKVGDHLEDQSSVPASPKRNTLVAAVSVLAILFLTLTIGVTLGALMHSSDSGPPESRSAPSAVNTDIASSIRTVCNVTHFPASCCSSISSLTASLQNPNDPESILKLSLRVSHDELSNLSSSLRSLASTSNALALSDCKDQIDDALSRLNDSVLAMDVAPGDKALTDAKINDIQTWISAALTDQETCLDGLEETESAELGEVKGKMQRSREYTSNSLAIAANIRILLQRFNVRLH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1556 245 FunFam Pectinesterase 77 234 - -
Prci9g1556 245 SMART PMEI_2 76 229 IPR006501 GO:0004857
Prci9g1556 245 PANTHER PECTINESTERASE INHIBITOR-LIKE 41 229 - -
Prci9g1556 245 CDD PMEI-like_3 83 233 - -
Prci9g1556 245 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 231 IPR035513 -
Prci9g1556 245 Pfam Plant invertase/pectin methylesterase inhibitor 80 229 IPR006501 GO:0004857
Prci9g1556 245 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 234 IPR035513 -
Prci9g1556 245 NCBIfam pectinesterase inhibitor domain 74 232 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1556 Prci-Chr9 28294703 28295955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1556 1 245 Carbohydrate Esterase AT1G53840 38.132 4.20e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1556 - - pcin:129300317 433.721