Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci9g1549 ATGGAAGGTGGTGATGATCTCCACCACCACCACCACCACCACCGTCCCAACTTCCCATTTCAGCTCCTCGAGAAGAAGGAAGATTACCAGGAGGCTGCTTCTTGTTCTACCTCTTCCTCTTACCCTTCTCTAGCCATCGCCGCCGAACCCGCCGCCTCCAATTCCAACCGATCCAACCAGGTCCTCAACGTCGTCCCTCCCACCTCTTCCTCCTCCGAACCCTCCAATAAGAAGCCCCCGCCTAAGAGAACTTCCACCAAGGACCGCCACACCAAGGTCGACGGTCGCGGCCGCCGTATCCGAATGCCGGCCCTGTGTGCCGCTCGCGTTTTCCAGCTCACCCGCGAGCTCGGCCATAAGTCCGACGGGGAGACCATCGAGTGGCTGCTCCAACAGGCCGAGCCCGCGGTCATCGCGGCTACGGGCACTGGAACGATCCCGGCTAATTTCACTTCCCTTAATATCTCTCTGAGAAGCTCCGGCTCCACCATGTCGGTCCCTTCTCAGCTCAGATCGTCTTACTTCAATCCCAACTTCTCCGTTCAGCAGCGGAGGAGCTTCTTCCCCGGAATCGGCTTGTCTTCCGATGGTAATAACACTTCAACGCTTCTGAATTTTCAGTCTAATAGTTTCTCCGGCGGCAGCATGTTGCAAGCAAAGCAGGAATTGCGCGGAGGCGAGGGAGGTGTTCCTTCCTCCTCGACAACAACCTTGGATTTGACGGAAGCGGAAGAAGGCATGGCAAGGAAAAGGCGACCGACGGAGCAAGAGTTGTCGCCGTCTACGTCGGCGCAGCAATATCAAATGGGAAGTTATTTGTTGCAATCGAGCGCTGGTGCGATTTCGACGAGCCACGCGCAGATTCCGGCAAATATATGGATGGTGACGAATTCGAATAATCAAGTCATGAGCGGGGATCCCATATGGACATTCCCTTCGGTGAATAATAGTGCTTTGTATAGAGGCGCTAGCATGTCCAGCGGCTTGCATTTTATGAACTTCCCCACTCCCATGGCCTTGTTGCCCGGTCAACAGTTAGGGTCGTCCGGGATTGGTGGCGGCGGAGCTGGGAATTTAAACGAAGGACATTTGAACATGCTTGCCGGGATCAACCCGTACCGGCAGATGAGTGGTGTTTCGGAGTCTCAGGCGAGTGGGTCTCAATCCCATCATGGTGGTGGTGGAGGCGGCGGCGGCGATGATCGACACGATACCGCCAGTCACCGCTCCTAG 1233 0.5604 MEGGDDLHHHHHHHRPNFPFQLLEKKEDYQEAASCSTSSSYPSLAIAAEPAASNSNRSNQVLNVVPPTSSSSEPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSVQQRRSFFPGIGLSSDGNNTSTLLNFQSNSFSGGSMLQAKQELRGGEGGVPSSSTTTLDLTEAEEGMARKRRPTEQELSPSTSAQQYQMGSYLLQSSAGAISTSHAQIPANIWMVTNSNNQVMSGDPIWTFPSVNNSALYRGASMSSGLHFMNFPTPMALLPGQQLGSSGIGGGGAGNLNEGHLNMLAGINPYRQMSGVSESQASGSQSHHGGGGGGGGDDRHDTASHRS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci9g1549 410 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 392 IPR005333 GO:0003700
Prci9g1549 410 MobiDBLite consensus disorder prediction 17 31 - -
Prci9g1549 410 MobiDBLite consensus disorder prediction 219 264 - -
Prci9g1549 410 Pfam TCP family transcription factor 84 214 IPR017887 -
Prci9g1549 410 ProSiteProfiles TCP domain profile. 86 140 IPR017887 -
Prci9g1549 410 MobiDBLite consensus disorder prediction 80 97 - -
Prci9g1549 410 MobiDBLite consensus disorder prediction 1 97 - -
Prci9g1549 410 MobiDBLite consensus disorder prediction 32 79 - -
Prci9g1549 410 MobiDBLite consensus disorder prediction 377 410 - -
Prci9g1549 410 MobiDBLite consensus disorder prediction 396 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci9g1549 Prci-Chr9 28262490 28264179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci9g1549 77 404 TCP Transcription Factor Family AT3G47620 43.373 8.92e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci9g1549 TCP 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci9g1549 - - vvo:131635423 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci9g1549 9 28262490 28264179 Prci9g1549 9 28262490 28264179 ECH